Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PTMAP2-201ENST00000397627 327 ntBASIC5.17□□□□□ -1.58
BRCA2P51587 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.17□□□□□ -1.58
BRCA2P51587 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BRCA2P51587 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.17□□□□□ -1.58
BRCA2P51587 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.17□□□□□ -1.58
BRCA2P51587 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.17□□□□□ -1.58
BRCA2P51587 AC073137.1-201ENST00000605636 634 ntBASIC5.17□□□□□ -1.58
BRCA2P51587 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.17□□□□□ -1.58
BRCA2P51587 OR14L1P-202ENST00000641545 3009 ntBASIC5.17□□□□□ -1.58
BRCA2P51587 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BRCA2P51587 AC009643.2-201ENST00000603543 1448 ntBASIC5.17□□□□□ -1.58
BRCA2P51587 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC5.17□□□□□ -1.58
BRCA2P51587 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.17□□□□□ -1.58
BRCA2P51587 MIR218-2-201ENST00000385006 110 ntBASIC5.17□□□□□ -1.58
BRCA2P51587 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.17□□□□□ -1.58
BRCA2P51587 TCEA1P3-201ENST00000443005 880 ntBASIC5.17□□□□□ -1.58
BRCA2P51587 AC090804.1-201ENST00000448870 490 ntBASIC5.17□□□□□ -1.58
BRCA2P51587 BX842559.2-201ENST00000451418 605 ntBASIC5.17□□□□□ -1.58
BRCA2P51587 DHFRP3-201ENST00000455595 559 ntBASIC5.17□□□□□ -1.58
BRCA2P51587 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.17□□□□□ -1.58
BRCA2P51587 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BRCA2P51587 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
BRCA2P51587 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
BRCA2P51587 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.17□□□□□ -1.58
BRCA2P51587 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
BRCA2P51587 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.16□□□□□ -1.58
BRCA2P51587 AC009238.2-201ENST00000431026 355 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 AL133547.1-201ENST00000448546 220 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.16□□□□□ -1.58
BRCA2P51587 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.16□□□□□ -1.58
BRCA2P51587 AC006116.5-201ENST00000591936 559 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 AL139124.1-201ENST00000609123 421 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.16□□□□□ -1.58
BRCA2P51587 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
BRCA2P51587 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
BRCA2P51587 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
BRCA2P51587 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BRCA2P51587 RNA5SP124-201ENST00000362739 110 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 RN7SKP177-201ENST00000410567 355 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 AC092647.1-201ENST00000420654 287 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 AC017019.1-201ENST00000426129 261 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.16□□□□□ -1.58
BRCA2P51587 CYCSP43-201ENST00000438233 310 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.16□□□□□ -1.58
BRCA2P51587 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.16□□□□□ -1.58
BRCA2P51587 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.16□□□□□ -1.58
BRCA2P51587 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
BRCA2P51587 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.16□□□□□ -1.58
BRCA2P51587 OR56B2P-202ENST00000641377 2453 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 RNU6-628P-201ENST00000410675 107 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 TMSB10P2-201ENST00000416049 131 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 BOLA3P4-201ENST00000418151 400 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.16□□□□□ -1.58
BRCA2P51587 AC092651.1-201ENST00000426110 312 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BRCA2P51587 AC007389.2-201ENST00000434630 306 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 TAAR4P-201ENST00000454843 1039 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 AC068993.1-201ENST00000546724 589 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 AGGF1P6-201ENST00000569213 976 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 MIR6875-201ENST00000617506 72 ntBASIC5.16□□□□□ -1.58
BRCA2P51587 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
BRCA2P51587 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
BRCA2P51587 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
BRCA2P51587 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
BRCA2P51587 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.15□□□□□ -1.58
BRCA2P51587 AC140479.3-201ENST00000418944 1126 ntBASIC5.15□□□□□ -1.58
BRCA2P51587 AC243960.7-201ENST00000623532 707 ntBASIC5.15□□□□□ -1.58
BRCA2P51587 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
BRCA2P51587 SACS-202ENST00000402364 15134 ntTSL 2 BASIC5.15□□□□□ -1.58
BRCA2P51587 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC5.15□□□□□ -1.58
BRCA2P51587 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
BRCA2P51587 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
BRCA2P51587 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.15□□□□□ -1.59
BRCA2P51587 SNORA71.2-201ENST00000364941 134 ntBASIC5.15□□□□□ -1.59
BRCA2P51587 AC011998.1-201ENST00000433403 117 ntBASIC5.15□□□□□ -1.59
BRCA2P51587 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.15□□□□□ -1.59
BRCA2P51587 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.15□□□□□ -1.59
BRCA2P51587 RNU6-709P-201ENST00000517257 104 ntBASIC5.15□□□□□ -1.59
BRCA2P51587 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.15□□□□□ -1.59
BRCA2P51587 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.15□□□□□ -1.59
BRCA2P51587 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.15□□□□□ -1.59
BRCA2P51587 RN7SL600P-201ENST00000581811 299 ntBASIC5.15□□□□□ -1.59
BRCA2P51587 AC053481.4-201ENST00000583164 216 ntBASIC5.15□□□□□ -1.59
BRCA2P51587 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
BRCA2P51587 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms