Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC008124.1-201ENST00000609803 9730 ntBASIC5.2□□□□□ -1.58
HTTP42858 HMGB3P5-201ENST00000428894 612 ntBASIC5.2□□□□□ -1.58
HTTP42858 NFYAP1-201ENST00000431953 972 ntBASIC5.2□□□□□ -1.58
HTTP42858 CYCSP43-201ENST00000438233 310 ntBASIC5.2□□□□□ -1.58
HTTP42858 AC006326.1-201ENST00000445465 787 ntBASIC5.2□□□□□ -1.58
HTTP42858 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.2□□□□□ -1.58
HTTP42858 AC107016.1-201ENST00000550463 337 ntBASIC5.2□□□□□ -1.58
HTTP42858 AP003497.2-201ENST00000624220 967 ntBASIC5.2□□□□□ -1.58
HTTP42858 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HTTP42858 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HTTP42858 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.2□□□□□ -1.58
HTTP42858 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HTTP42858 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC5.2□□□□□ -1.58
HTTP42858 RNA5SP119-201ENST00000362715 117 ntBASIC5.2□□□□□ -1.58
HTTP42858 SNORA71.2-201ENST00000364941 134 ntBASIC5.2□□□□□ -1.58
HTTP42858 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HTTP42858 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HTTP42858 AL445584.1-201ENST00000431451 330 ntBASIC5.2□□□□□ -1.58
HTTP42858 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.2□□□□□ -1.58
HTTP42858 BX842559.2-201ENST00000451418 605 ntBASIC5.2□□□□□ -1.58
HTTP42858 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.2□□□□□ -1.58
HTTP42858 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.2□□□□□ -1.58
HTTP42858 PSMB7P1-201ENST00000556349 514 ntBASIC5.2□□□□□ -1.58
HTTP42858 AC069061.3-201ENST00000582254 823 ntBASIC5.2□□□□□ -1.58
HTTP42858 RN7SL435P-201ENST00000584418 282 ntBASIC5.2□□□□□ -1.58
HTTP42858 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.2□□□□□ -1.58
HTTP42858 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HTTP42858 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HTTP42858 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HTTP42858 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.2□□□□□ -1.58
HTTP42858 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HTTP42858 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HTTP42858 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HTTP42858 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HTTP42858 AC021146.4-201ENST00000309229 279 ntBASIC5.19□□□□□ -1.58
HTTP42858 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HTTP42858 AC233289.1-201ENST00000403700 508 ntBASIC5.19□□□□□ -1.58
HTTP42858 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.19□□□□□ -1.58
HTTP42858 ARL4AP4-201ENST00000434170 518 ntBASIC5.19□□□□□ -1.58
HTTP42858 RPL5P32-201ENST00000454085 879 ntBASIC5.19□□□□□ -1.58
HTTP42858 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.19□□□□□ -1.58
HTTP42858 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.19□□□□□ -1.58
HTTP42858 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.19□□□□□ -1.58
HTTP42858 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.19□□□□□ -1.58
HTTP42858 VN1R92P-201ENST00000598511 928 ntBASIC5.19□□□□□ -1.58
HTTP42858 AC007179.3-201ENST00000604976 235 ntBASIC5.19□□□□□ -1.58
HTTP42858 AC243960.7-201ENST00000623532 707 ntBASIC5.19□□□□□ -1.58
HTTP42858 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HTTP42858 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HTTP42858 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HTTP42858 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.19□□□□□ -1.58
HTTP42858 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HTTP42858 ICE2P1-201ENST00000512800 1849 ntBASIC5.19□□□□□ -1.58
HTTP42858 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HTTP42858 AL132838.2-201ENST00000492041 314 ntBASIC5.19□□□□□ -1.58
HTTP42858 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.19□□□□□ -1.58
HTTP42858 AL121772.2-201ENST00000614331 297 ntBASIC5.19□□□□□ -1.58
HTTP42858 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HTTP42858 AC011815.3-201ENST00000624194 473 ntBASIC5.19□□□□□ -1.58
HTTP42858 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HTTP42858 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HTTP42858 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HTTP42858 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HTTP42858 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HTTP42858 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.19□□□□□ -1.58
HTTP42858 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.19□□□□□ -1.58
HTTP42858 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HTTP42858 RNA5SP223-201ENST00000365174 120 ntBASIC5.19□□□□□ -1.58
HTTP42858 RNU6-628P-201ENST00000410675 107 ntBASIC5.19□□□□□ -1.58
HTTP42858 GOT2P5-201ENST00000433995 546 ntBASIC5.19□□□□□ -1.58
HTTP42858 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.19□□□□□ -1.58
HTTP42858 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.19□□□□□ -1.58
HTTP42858 MTCYBP13-201ENST00000578634 1093 ntBASIC5.19□□□□□ -1.58
HTTP42858 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.19□□□□□ -1.58
HTTP42858 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.18□□□□□ -1.58
HTTP42858 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.18□□□□□ -1.58
HTTP42858 AL157884.3-201ENST00000448273 1184 ntBASIC5.18□□□□□ -1.58
HTTP42858 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.18□□□□□ -1.58
HTTP42858 NPM1P41-201ENST00000512920 831 ntBASIC5.18□□□□□ -1.58
HTTP42858 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.18□□□□□ -1.58
HTTP42858 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.18□□□□□ -1.58
HTTP42858 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.18□□□□□ -1.58
HTTP42858 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.18□□□□□ -1.58
HTTP42858 AC106782.4-201ENST00000568264 210 ntBASIC5.18□□□□□ -1.58
HTTP42858 AC020978.9-201ENST00000624380 1141 ntBASIC5.18□□□□□ -1.58
HTTP42858 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.18□□□□□ -1.58
HTTP42858 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.18□□□□□ -1.58
HTTP42858 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC5.18□□□□□ -1.58
HTTP42858 LARP1BP1-201ENST00000506036 1359 ntBASIC5.18□□□□□ -1.58
HTTP42858 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HTTP42858 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HTTP42858 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC5.18□□□□□ -1.58
HTTP42858 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms