Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AP000534.2-201ENST00000412729 568 ntBASIC4.73□□□□□ -1.65
SHC1P29353 MARK2P12-201ENST00000420129 585 ntBASIC4.73□□□□□ -1.65
SHC1P29353 AC093655.2-201ENST00000425735 631 ntBASIC4.73□□□□□ -1.65
SHC1P29353 AC090018.1-201ENST00000434369 367 ntBASIC4.73□□□□□ -1.65
SHC1P29353 CLUHP1-201ENST00000435012 1190 ntBASIC4.73□□□□□ -1.65
SHC1P29353 CNOT7P2-201ENST00000441051 832 ntBASIC4.73□□□□□ -1.65
SHC1P29353 RPS11P7-201ENST00000442125 465 ntBASIC4.73□□□□□ -1.65
SHC1P29353 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.73□□□□□ -1.65
SHC1P29353 RN7SL172P-201ENST00000460535 303 ntBASIC4.73□□□□□ -1.65
SHC1P29353 AGGF1P3-201ENST00000493675 1213 ntBASIC4.73□□□□□ -1.65
SHC1P29353 RPS4XP20-201ENST00000505751 772 ntBASIC4.73□□□□□ -1.65
SHC1P29353 AP001960.1-201ENST00000506494 658 ntBASIC4.73□□□□□ -1.65
SHC1P29353 CCNHP1-201ENST00000513311 678 ntBASIC4.73□□□□□ -1.65
SHC1P29353 RNA5SP34-201ENST00000516887 130 ntBASIC4.73□□□□□ -1.65
SHC1P29353 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.73□□□□□ -1.65
SHC1P29353 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.73□□□□□ -1.65
SHC1P29353 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.73□□□□□ -1.65
SHC1P29353 AC092451.2-201ENST00000538746 658 ntBASIC4.73□□□□□ -1.65
SHC1P29353 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.73□□□□□ -1.65
SHC1P29353 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.73□□□□□ -1.65
SHC1P29353 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.73□□□□□ -1.65
SHC1P29353 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.73□□□□□ -1.65
SHC1P29353 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.73□□□□□ -1.65
SHC1P29353 AC090527.3-201ENST00000619041 548 ntBASIC4.73□□□□□ -1.65
SHC1P29353 MIR6839-201ENST00000620425 113 ntBASIC4.73□□□□□ -1.65
SHC1P29353 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.73□□□□□ -1.65
SHC1P29353 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.73□□□□□ -1.65
SHC1P29353 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.73□□□□□ -1.65
SHC1P29353 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHC1P29353 AC093909.5-201ENST00000621839 1799 ntBASIC4.73□□□□□ -1.65
SHC1P29353 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.73□□□□□ -1.65
SHC1P29353 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SHC1P29353 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.72□□□□□ -1.65
SHC1P29353 AL929601.4-201ENST00000613011 1341 ntBASIC4.72□□□□□ -1.65
SHC1P29353 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SHC1P29353 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 AC000374.1-201ENST00000434698 1745 ntBASIC4.72□□□□□ -1.65
SHC1P29353 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHC1P29353 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHC1P29353 MTHFD2P5-201ENST00000320415 844 ntBASIC4.72□□□□□ -1.65
SHC1P29353 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 RNU4-23P-201ENST00000362839 140 ntBASIC4.72□□□□□ -1.65
SHC1P29353 RN7SKP74-201ENST00000362849 309 ntBASIC4.72□□□□□ -1.65
SHC1P29353 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SHC1P29353 MIR589-201ENST00000385238 99 ntBASIC4.72□□□□□ -1.65
SHC1P29353 NPM1P40-201ENST00000412758 733 ntBASIC4.72□□□□□ -1.65
SHC1P29353 AL139148.1-201ENST00000427122 680 ntBASIC4.72□□□□□ -1.65
SHC1P29353 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.72□□□□□ -1.65
SHC1P29353 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.72□□□□□ -1.65
SHC1P29353 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.72□□□□□ -1.65
SHC1P29353 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.72□□□□□ -1.65
SHC1P29353 Z92846.1-201ENST00000456203 268 ntBASIC4.72□□□□□ -1.65
SHC1P29353 AC079168.1-201ENST00000458741 345 ntBASIC4.72□□□□□ -1.65
SHC1P29353 AC074386.1-201ENST00000476560 767 ntBASIC4.72□□□□□ -1.65
SHC1P29353 AC079841.1-201ENST00000481228 950 ntBASIC4.72□□□□□ -1.65
SHC1P29353 RPL7P40-201ENST00000481703 745 ntBASIC4.72□□□□□ -1.65
SHC1P29353 RN7SL30P-201ENST00000488416 306 ntBASIC4.72□□□□□ -1.65
SHC1P29353 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.72□□□□□ -1.65
SHC1P29353 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.72□□□□□ -1.65
SHC1P29353 SETP12-201ENST00000514068 805 ntBASIC4.72□□□□□ -1.65
SHC1P29353 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.72□□□□□ -1.65
SHC1P29353 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.72□□□□□ -1.65
SHC1P29353 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.72□□□□□ -1.65
SHC1P29353 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.72□□□□□ -1.65
SHC1P29353 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.72□□□□□ -1.65
SHC1P29353 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.72□□□□□ -1.65
SHC1P29353 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.72□□□□□ -1.65
SHC1P29353 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.72□□□□□ -1.65
SHC1P29353 AC010547.7-201ENST00000570323 333 ntBASIC4.72□□□□□ -1.65
SHC1P29353 MIR4472-2-201ENST00000582069 67 ntBASIC4.72□□□□□ -1.65
SHC1P29353 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.72□□□□□ -1.65
SHC1P29353 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.72□□□□□ -1.65
SHC1P29353 AP003400.2-201ENST00000624036 666 ntBASIC4.72□□□□□ -1.65
SHC1P29353 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.72□□□□□ -1.65
SHC1P29353 C4BPAP1-201ENST00000415474 1893 ntBASIC4.72□□□□□ -1.65
SHC1P29353 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.72□□□□□ -1.65
SHC1P29353 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SHC1P29353 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHC1P29353 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SHC1P29353 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SHC1P29353 AL590763.1-201ENST00000398297 1545 ntBASIC4.72□□□□□ -1.65
SHC1P29353 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SHC1P29353 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHC1P29353 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHC1P29353 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHC1P29353 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
SHC1P29353 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHC1P29353 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms