Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN6P29350 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN6P29350 MTCO1P8-201ENST00000416914 1523 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PTPN6P29350 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN6P29350 AC010132.2-201ENST00000295493 1043 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTPN6P29350 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN6P29350 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.99□□□□□ -1.61
PTPN6P29350 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTPN6P29350 AL035696.2-201ENST00000407941 709 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.99□□□□□ -1.61
PTPN6P29350 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN6P29350 LYPLA1P1-201ENST00000434514 622 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN6P29350 CYCSP12-201ENST00000437729 300 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.99□□□□□ -1.61
PTPN6P29350 AC105399.1-202ENST00000447303 205 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN6P29350 RPL7P45-201ENST00000455851 743 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 AC011225.1-201ENST00000457751 369 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN6P29350 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN6P29350 SCARNA16.4-201ENST00000516956 187 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 AC027308.1-201ENST00000517993 110 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN6P29350 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.99□□□□□ -1.61
PTPN6P29350 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.99□□□□□ -1.61
PTPN6P29350 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN6P29350 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN6P29350 AL390334.1-201ENST00000556395 450 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.99□□□□□ -1.61
PTPN6P29350 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.99□□□□□ -1.61
PTPN6P29350 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.99□□□□□ -1.61
PTPN6P29350 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN6P29350 AC008814.1-201ENST00000603797 406 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 IMMP1LP3-201ENST00000604197 224 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN6P29350 AP002967.1-201ENST00000624203 539 ntBASIC4.99□□□□□ -1.61
PTPN6P29350 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PTPN6P29350 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.99□□□□□ -1.61
PTPN6P29350 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN6P29350 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PTPN6P29350 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.98□□□□□ -1.61
PTPN6P29350 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN6P29350 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN6P29350 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PTPN6P29350 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN6P29350 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.98□□□□□ -1.61
PTPN6P29350 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN6P29350 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PTPN6P29350 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PTPN6P29350 AL603750.1-201ENST00000624216 1717 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
PTPN6P29350 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN6P29350 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN6P29350 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PTPN6P29350 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN6P29350 MIR133B-201ENST00000362210 119 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 RNA5SP335-201ENST00000363817 110 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 AL133388.1-201ENST00000404509 287 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 TRIM60P17-201ENST00000415181 719 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN6P29350 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.98□□□□□ -1.61
PTPN6P29350 RAD1P2-201ENST00000446414 663 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 MYO5BP2-201ENST00000449815 1277 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.98□□□□□ -1.61
PTPN6P29350 BX842559.2-201ENST00000451418 605 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 AC026348.1-201ENST00000462549 1053 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.98□□□□□ -1.61
PTPN6P29350 RN7SL423P-201ENST00000486202 304 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN6P29350 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN6P29350 AC022133.1-201ENST00000490961 571 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN6P29350 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.98□□□□□ -1.61
PTPN6P29350 RNA5SP373-201ENST00000517271 95 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 YWHABP2-201ENST00000540201 713 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 BLZF2P-201ENST00000553776 1130 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.98□□□□□ -1.61
PTPN6P29350 AC005341.1-201ENST00000571086 708 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.98□□□□□ -1.61
PTPN6P29350 FKBP1AP1-201ENST00000594588 318 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 AC023813.4-201ENST00000607580 580 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 WBP1LP8-201ENST00000617401 327 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 AC105105.5-201ENST00000622635 1294 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.98□□□□□ -1.61
PTPN6P29350 CASC19-264ENST00000641912 1184 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 AC132825.1-201ENST00000463573 2247 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN6P29350 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN6P29350 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN6P29350 CASC19-281ENST00000642118 1554 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN6P29350 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.98□□□□□ -1.61
PTPN6P29350 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
PTPN6P29350 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN6P29350 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms