Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 RN7SL799P-201ENST00000475891 298 ntBASIC3.9□□□□□ -1.79
HLA-DMBP28068 AC024558.1-201ENST00000505008 528 ntBASIC3.9□□□□□ -1.79
HLA-DMBP28068 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.9□□□□□ -1.79
HLA-DMBP28068 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMBP28068 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 AL139041.1-201ENST00000605480 610 ntBASIC3.9□□□□□ -1.79
HLA-DMBP28068 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMBP28068 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.9□□□□□ -1.79
HLA-DMBP28068 AC037198.3-201ENST00000616754 526 ntBASIC3.9□□□□□ -1.79
HLA-DMBP28068 WBP1LP8-201ENST00000617401 327 ntBASIC3.9□□□□□ -1.79
HLA-DMBP28068 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 AC074101.1-201ENST00000637861 241 ntBASIC3.9□□□□□ -1.79
HLA-DMBP28068 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 AC073869.10-201ENST00000642016 354 ntBASIC3.9□□□□□ -1.79
HLA-DMBP28068 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMBP28068 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMBP28068 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMBP28068 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMBP28068 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMBP28068 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMBP28068 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.9□□□□□ -1.79
HLA-DMBP28068 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
HLA-DMBP28068 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMBP28068 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMBP28068 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMBP28068 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMBP28068 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMBP28068 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 RNA5SP339-201ENST00000390987 122 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 AL359643.1-201ENST00000404109 423 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 RN7SKP247-201ENST00000411094 308 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC016769.2-201ENST00000414815 475 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC104333.2-201ENST00000422630 192 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 EI24P4-201ENST00000423683 1078 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 RPS29P10-201ENST00000439197 166 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 RPS11P7-201ENST00000442125 465 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 AURKAPS1-201ENST00000451805 1212 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC097173.1-201ENST00000505862 819 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC006499.3-201ENST00000506077 748 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 OR5M14P-201ENST00000506803 618 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC126177.5-201ENST00000549599 178 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMBP28068 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMBP28068 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMBP28068 SCARNA15-201ENST00000607520 4325 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 CR383656.5-201ENST00000547616 1340 ntBASIC3.89□□□□□ -1.79
HLA-DMBP28068 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DMBP28068 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMBP28068 MAPK10-286ENST00000641208 8747 ntBASIC3.88□□□□□ -1.79
HLA-DMBP28068 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DMBP28068 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DMBP28068 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DMBP28068 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms