Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC087385.3-201ENST00000620477 187 ntBASIC4.25□□□□□ -1.73
COL8A2P25067 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.25□□□□□ -1.73
COL8A2P25067 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.25□□□□□ -1.73
COL8A2P25067 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL8A2P25067 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.25□□□□□ -1.73
COL8A2P25067 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL8A2P25067 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL8A2P25067 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL8A2P25067 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.25□□□□□ -1.73
COL8A2P25067 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
COL8A2P25067 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL8A2P25067 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL8A2P25067 AC012078.1-201ENST00000405035 1646 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL8A2P25067 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.24□□□□□ -1.73
COL8A2P25067 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL8A2P25067 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.24□□□□□ -1.73
COL8A2P25067 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 GAPDHP15-201ENST00000398586 975 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 EI24P3-201ENST00000399046 1062 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 AL035079.1-201ENST00000405210 287 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 RPL37P18-201ENST00000411602 243 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.24□□□□□ -1.73
COL8A2P25067 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.24□□□□□ -1.73
COL8A2P25067 AF186996.5-201ENST00000418098 904 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 RPL12P43-201ENST00000420608 499 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 AL360081.1-201ENST00000428299 555 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 HSPD1P12-201ENST00000429127 1069 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.24□□□□□ -1.73
COL8A2P25067 AC008072.1-201ENST00000434254 824 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.24□□□□□ -1.73
COL8A2P25067 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.24□□□□□ -1.73
COL8A2P25067 OR7E125P-201ENST00000443450 846 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 AL354714.3-201ENST00000447284 493 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.24□□□□□ -1.73
COL8A2P25067 GAPDHP14-201ENST00000450472 937 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.24□□□□□ -1.73
COL8A2P25067 AC092324.1-201ENST00000468671 324 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 COX6B1P2-201ENST00000489624 230 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 RN7SL591P-201ENST00000496150 292 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.24□□□□□ -1.73
COL8A2P25067 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.24□□□□□ -1.73
COL8A2P25067 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.24□□□□□ -1.73
COL8A2P25067 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.24□□□□□ -1.73
COL8A2P25067 AL031320.1-201ENST00000604177 357 ntBASIC4.24□□□□□ -1.73
COL8A2P25067 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
COL8A2P25067 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
COL8A2P25067 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
COL8A2P25067 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.24□□□□□ -1.73
COL8A2P25067 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
COL8A2P25067 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL8A2P25067 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.24□□□□□ -1.73
COL8A2P25067 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
COL8A2P25067 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
COL8A2P25067 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL8A2P25067 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL8A2P25067 MUC2-202ENST00000613187 4845 ntBASIC4.23□□□□□ -1.73
COL8A2P25067 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL8A2P25067 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.23□□□□□ -1.73
COL8A2P25067 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
COL8A2P25067 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL8A2P25067 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL8A2P25067 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL8A2P25067 COX6CP13-201ENST00000428703 226 ntBASIC4.23□□□□□ -1.73
COL8A2P25067 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.23□□□□□ -1.73
COL8A2P25067 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.23□□□□□ -1.73
COL8A2P25067 AL161722.1-201ENST00000446972 1032 ntBASIC4.23□□□□□ -1.73
COL8A2P25067 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.23□□□□□ -1.73
COL8A2P25067 AC091180.1-201ENST00000462104 372 ntBASIC4.23□□□□□ -1.73
COL8A2P25067 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.23□□□□□ -1.73
COL8A2P25067 AC017007.3-201ENST00000479865 435 ntBASIC4.23□□□□□ -1.73
COL8A2P25067 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.23□□□□□ -1.73
COL8A2P25067 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL8A2P25067 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.23□□□□□ -1.73
COL8A2P25067 GCSHP4-201ENST00000538792 439 ntBASIC4.23□□□□□ -1.73
COL8A2P25067 LSM3P2-201ENST00000551246 273 ntBASIC4.23□□□□□ -1.73
COL8A2P25067 EDDM3DP-201ENST00000554692 434 ntBASIC4.23□□□□□ -1.73
COL8A2P25067 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.23□□□□□ -1.73
COL8A2P25067 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.23□□□□□ -1.73
COL8A2P25067 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.23□□□□□ -1.73
COL8A2P25067 AL136295.6-201ENST00000610486 658 ntBASIC4.23□□□□□ -1.73
COL8A2P25067 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.23□□□□□ -1.73
COL8A2P25067 AL731532.2-201ENST00000623542 1953 ntBASIC4.23□□□□□ -1.73
COL8A2P25067 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.23□□□□□ -1.73
COL8A2P25067 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL8A2P25067 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
COL8A2P25067 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL8A2P25067 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms