Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MIR4489-201ENST00000578869 62 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC006272.2-201ENST00000594725 163 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AL162431.4-201ENST00000604674 411 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 MIR6839-201ENST00000620425 113 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 MIR6837-201ENST00000620884 64 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC145207.9-201ENST00000623802 325 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC019080.5-201ENST00000624891 757 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 OR55B1P-203ENST00000641518 2602 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.34□□□□□ -1.56
HLA-DPA1P20036 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
HLA-DPA1P20036 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HLA-DPA1P20036 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
HLA-DPA1P20036 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.34□□□□□ -1.56
HLA-DPA1P20036 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 CIR1P2-201ENST00000514821 1342 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 RNA5SP183-201ENST00000362452 119 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 RN7SKP162-201ENST00000363605 345 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 SNORA5.1-201ENST00000384275 131 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 MIR7-1-201ENST00000384871 110 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 CFL1P1-202ENST00000432948 411 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AL161722.2-201ENST00000434731 981 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AL157385.1-201ENST00000446973 268 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 RPS26P39-201ENST00000469206 341 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AC074386.1-201ENST00000476560 767 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 RN7SL809P-201ENST00000482040 297 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 RN7SL814P-201ENST00000487715 300 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 MTCYBP19-201ENST00000517463 1124 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AC104997.1-201ENST00000519761 717 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AC005021.1-201ENST00000608730 355 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AL359513.1-201ENST00000614364 557 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AC004158.1-201ENST00000564508 4319 ntBASIC5.33□□□□□ -1.56
HLA-DPA1P20036 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DPA1P20036 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 CASC19-284ENST00000642142 1868 ntBASIC5.32□□□□□ -1.56
HLA-DPA1P20036 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 SNORA67-201ENST00000384423 137 ntBASIC5.32□□□□□ -1.56
HLA-DPA1P20036 MIR589-201ENST00000385238 99 ntBASIC5.32□□□□□ -1.56
HLA-DPA1P20036 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 GTF3AP1-201ENST00000416942 1004 ntBASIC5.32□□□□□ -1.56
HLA-DPA1P20036 BTF3P9-201ENST00000418784 283 ntBASIC5.32□□□□□ -1.56
HLA-DPA1P20036 MARK2P12-201ENST00000420129 585 ntBASIC5.32□□□□□ -1.56
HLA-DPA1P20036 AC093655.2-201ENST00000425735 631 ntBASIC5.32□□□□□ -1.56
HLA-DPA1P20036 VTI1BP4-201ENST00000427516 527 ntBASIC5.32□□□□□ -1.56
HLA-DPA1P20036 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DPA1P20036 GAPDHP58-201ENST00000438477 1006 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms