| MUC1 | P15941 | KLHL4-202 | ENST00000373119 | 5818 nt | APPRIS P1 TSL 1 (best) BASIC | 4.4 | □□□□□ -1.7 | | |
| MUC1 | P15941 | MUM1L1-202 | ENST00000357175 | 4173 nt | APPRIS P1 TSL 2 BASIC | 4.4 | □□□□□ -1.7 | | |
| MUC1 | P15941 | LINC01289-201 | ENST00000519550 | 3712 nt | TSL 1 (best) BASIC | 4.4 | □□□□□ -1.7 | | |
| MUC1 | P15941 | MAPK10-235 | ENST00000638225 | 8941 nt | APPRIS P2 TSL 1 (best) BASIC | 4.4 | □□□□□ -1.7 | | |
| MUC1 | P15941 | WDR7-201 | ENST00000254442 | 14083 nt | APPRIS P1 TSL 1 (best) BASIC | 4.4 | □□□□□ -1.7 | | |
| MUC1 | P15941 | LINC02261-201 | ENST00000512873 | 2802 nt | TSL 2 BASIC | 4.4 | □□□□□ -1.7 | | |
| MUC1 | P15941 | OR1L8-201 | ENST00000304865 | 1061 nt | APPRIS P1 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | RNU1-74P-201 | ENST00000384108 | 171 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | MIR589-201 | ENST00000385238 | 99 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | PSMA3-202 | ENST00000412908 | 908 nt | TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | LINC01891-201 | ENST00000439798 | 538 nt | TSL 4 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | FMR1-IT1-201 | ENST00000441414 | 343 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC091685.1-201 | ENST00000442436 | 448 nt | TSL 3 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AL161629.1-201 | ENST00000446201 | 457 nt | TSL 3 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AL356421.2-201 | ENST00000446733 | 197 nt | TSL 3 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | RN7SL172P-201 | ENST00000460535 | 303 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | LINC02083-201 | ENST00000462835 | 515 nt | TSL 3 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | RPL7AP10-201 | ENST00000481016 | 791 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC015864.1-201 | ENST00000496512 | 544 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC112496.1-201 | ENST00000497961 | 562 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | BMPR1B-204 | ENST00000502683 | 567 nt | TSL 4 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | LINC02492-201 | ENST00000502952 | 564 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC110760.1-201 | ENST00000513770 | 590 nt | TSL 3 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | E2F5-204 | ENST00000517476 | 1094 nt | TSL 2 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | PRR4-212 | ENST00000544994 | 326 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | RN7SL708P-201 | ENST00000580952 | 299 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | RN7SL52P-201 | ENST00000584271 | 284 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC004448.4-204 | ENST00000585389 | 743 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | ZNF561-AS1-207 | ENST00000591932 | 676 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC010618.3-202 | ENST00000598141 | 476 nt | TSL 3 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC008814.1-201 | ENST00000603797 | 406 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC002128.2-201 | ENST00000604161 | 618 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AL137246.1-201 | ENST00000607072 | 977 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | RNU6-84P-201 | ENST00000607737 | 102 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | OR7M1P-201 | ENST00000608946 | 533 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | DEC1-204 | ENST00000614246 | 210 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | MIR6886-201 | ENST00000619864 | 61 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | MIR6839-201 | ENST00000620425 | 113 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | MYNN-203 | ENST00000544106 | 4815 nt | TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | ZNF207-203 | ENST00000394670 | 13781 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | DNAJC9-AS1-204 | ENST00000440197 | 2865 nt | TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | ZMYM6-201 | ENST00000317538 | 2702 nt | TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | PCDH9-201 | ENST00000377861 | 28227 nt | TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC021205.3-201 | ENST00000609680 | 1709 nt | TSL 3 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC006210.2-201 | ENST00000367074 | 1545 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | DNAH12-203 | ENST00000389536 | 2613 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC104118.1-201 | ENST00000607625 | 1589 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | ADGRL2-204 | ENST00000370715 | 5585 nt | TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | GABRG2-217 | ENST00000639384 | 5360 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | POT1-AS1-205 | ENST00000453342 | 3252 nt | TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| MUC1 | P15941 | FILIP1-201 | ENST00000237172 | 4580 nt | APPRIS P1 TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | VN2R3P-201 | ENST00000422626 | 1412 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | MTND5P12-201 | ENST00000502851 | 1449 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | GTDC1-220 | ENST00000618778 | 2317 nt | TSL 5 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | ANKRD30A-201 | ENST00000361713 | 4405 nt | APPRIS P2 TSL 5 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | TAS2R8-201 | ENST00000240615 | 1243 nt | APPRIS P1 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | SSMEM1-201 | ENST00000297819 | 1159 nt | APPRIS P1 TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | SNORA17.1-201 | ENST00000362945 | 126 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | RNA5SP90-201 | ENST00000364801 | 99 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | RNA5SP223-201 | ENST00000365174 | 120 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | TEX35-202 | ENST00000367639 | 785 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | MIR323B-201 | ENST00000385269 | 82 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC005522.1-201 | ENST00000395416 | 346 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC007738.1-201 | ENST00000413892 | 348 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | MARK2P12-201 | ENST00000420129 | 585 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | GNRH1-202 | ENST00000421054 | 470 nt | APPRIS P1 TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC241644.1-201 | ENST00000431525 | 446 nt | TSL 3 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | OR52B5P-201 | ENST00000435337 | 951 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | LINC00704-203 | ENST00000449712 | 703 nt | TSL 3 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AL591363.1-201 | ENST00000450091 | 483 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | RN7SL814P-201 | ENST00000487715 | 300 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC015522.1-201 | ENST00000523678 | 640 nt | TSL 3 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | HAGLR-211 | ENST00000549329 | 609 nt | TSL 4 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | PCLAF-203 | ENST00000558008 | 766 nt | TSL 3 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC105036.1-201 | ENST00000566222 | 271 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | RN7SL176P-201 | ENST00000580352 | 264 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC104365.1-202 | ENST00000587080 | 398 nt | TSL 3 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC008794.2-201 | ENST00000587779 | 293 nt | TSL 2 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC005702.2-201 | ENST00000591035 | 481 nt | APPRIS P1 TSL 3 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | LINC01676-204 | ENST00000595309 | 871 nt | TSL 5 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | Z98949.1-220 | ENST00000609809 | 804 nt | TSL 5 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC126915.2-201 | ENST00000610957 | 190 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AL353770.4-201 | ENST00000614936 | 468 nt | TSL 5 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AL590491.2-203 | ENST00000614969 | 468 nt | TSL 4 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | MTCO1P1-201 | ENST00000624263 | 1081 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | OR52B5P-202 | ENST00000641118 | 1110 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | SAMSN1-206 | ENST00000619120 | 2028 nt | TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | PALMD-201 | ENST00000263174 | 2510 nt | APPRIS P1 TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | CIR1P2-201 | ENST00000514821 | 1342 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | EMSY-215 | ENST00000533248 | 3798 nt | TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | MPDZ-204 | ENST00000381022 | 7589 nt | APPRIS ALT2 TSL 5 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | FAM26D-201 | ENST00000368596 | 1353 nt | APPRIS P1 TSL 5 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | RNF182-207 | ENST00000537663 | 3382 nt | APPRIS P1 TSL 4 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | LIMA1-214 | ENST00000552783 | 3612 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | AC011493.1-201 | ENST00000596753 | 1632 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | DNAH6-202 | ENST00000389394 | 12795 nt | APPRIS P1 TSL 5 BASIC | 4.39 | □□□□□ -1.71 | | |
| MUC1 | P15941 | FAM216B-201 | ENST00000313851 | 3243 nt | APPRIS P1 TSL 1 (best) BASIC | 4.38 | □□□□□ -1.71 | | |
| MUC1 | P15941 | PLCB4-204 | ENST00000378501 | 5833 nt | APPRIS P4 TSL 5 BASIC | 4.38 | □□□□□ -1.71 | | |
| MUC1 | P15941 | LINC01748-204 | ENST00000635048 | 5678 nt | TSL 5 BASIC | 4.38 | □□□□□ -1.71 | | |
| MUC1 | P15941 | TCHHL1-201 | ENST00000368806 | 3603 nt | APPRIS P1 TSL 1 (best) BASIC | 4.38 | □□□□□ -1.71 | | |