Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TOP2AP11388 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TOP2AP11388 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TOP2AP11388 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC8.44□□□□□ -1.06
TOP2AP11388 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.44□□□□□ -1.06
TOP2AP11388 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC8.44□□□□□ -1.06
TOP2AP11388 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC8.44□□□□□ -1.06
TOP2AP11388 AC020937.1-201ENST00000519677 1013 ntBASIC8.44□□□□□ -1.06
TOP2AP11388 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TOP2AP11388 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC8.43□□□□□ -1.06
TOP2AP11388 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TOP2AP11388 SAMMSON-210ENST00000641260 1308 ntBASIC8.43□□□□□ -1.06
TOP2AP11388 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TOP2AP11388 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TOP2AP11388 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TOP2AP11388 RAD17P1-201ENST00000418130 2042 ntBASIC8.43□□□□□ -1.06
TOP2AP11388 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TOP2AP11388 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.43□□□□□ -1.06
TOP2AP11388 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TOP2AP11388 GAPDHP49-201ENST00000421421 961 ntBASIC8.43□□□□□ -1.06
TOP2AP11388 FHP1-201ENST00000442741 703 ntBASIC8.43□□□□□ -1.06
TOP2AP11388 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
TOP2AP11388 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC8.43□□□□□ -1.06
TOP2AP11388 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.43□□□□□ -1.06
TOP2AP11388 AC026367.3-201ENST00000619032 590 ntBASIC8.43□□□□□ -1.06
TOP2AP11388 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TOP2AP11388 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TOP2AP11388 AC025574.1-201ENST00000554784 1653 ntBASIC8.43□□□□□ -1.06
TOP2AP11388 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC8.43□□□□□ -1.06
TOP2AP11388 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TOP2AP11388 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TOP2AP11388 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TOP2AP11388 SNORA57.1-201ENST00000391227 145 ntBASIC8.42□□□□□ -1.06
TOP2AP11388 MIR1193-201ENST00000408109 78 ntBASIC8.42□□□□□ -1.06
TOP2AP11388 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC8.42□□□□□ -1.06
TOP2AP11388 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC8.42□□□□□ -1.06
TOP2AP11388 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC8.42□□□□□ -1.06
TOP2AP11388 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TOP2AP11388 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC8.42□□□□□ -1.06
TOP2AP11388 AC087360.1-201ENST00000518788 616 ntBASIC8.42□□□□□ -1.06
TOP2AP11388 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC8.42□□□□□ -1.06
TOP2AP11388 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TOP2AP11388 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC8.42□□□□□ -1.06
TOP2AP11388 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TOP2AP11388 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TOP2AP11388 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TOP2AP11388 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TOP2AP11388 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TOP2AP11388 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
TOP2AP11388 OR4K17-201ENST00000315543 1032 ntBASIC8.41□□□□□ -1.06
TOP2AP11388 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
TOP2AP11388 RPL31-204ENST00000409038 817 ntTSL 2 BASIC8.41□□□□□ -1.06
TOP2AP11388 RN7SKP267-201ENST00000410381 285 ntBASIC8.41□□□□□ -1.06
TOP2AP11388 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.41□□□□□ -1.06
TOP2AP11388 RPS17P8-201ENST00000434525 335 ntBASIC8.41□□□□□ -1.06
TOP2AP11388 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC8.41□□□□□ -1.06
TOP2AP11388 AC025164.1-201ENST00000496249 478 ntBASIC8.41□□□□□ -1.06
TOP2AP11388 RN7SL558P-201ENST00000497468 299 ntBASIC8.41□□□□□ -1.06
TOP2AP11388 RNU6-709P-201ENST00000517257 104 ntBASIC8.41□□□□□ -1.06
TOP2AP11388 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC8.41□□□□□ -1.06
TOP2AP11388 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC8.41□□□□□ -1.06
TOP2AP11388 AL109766.1-201ENST00000555080 552 ntBASIC8.41□□□□□ -1.06
TOP2AP11388 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC8.41□□□□□ -1.06
TOP2AP11388 AC067959.1-201ENST00000604334 379 ntBASIC8.41□□□□□ -1.06
TOP2AP11388 AL109618.2-201ENST00000605527 211 ntBASIC8.41□□□□□ -1.06
TOP2AP11388 AL121932.1-201ENST00000605542 214 ntBASIC8.41□□□□□ -1.06
TOP2AP11388 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TOP2AP11388 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TOP2AP11388 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TOP2AP11388 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
TOP2AP11388 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TOP2AP11388 ACTR3BP2-202ENST00000623630 1338 ntBASIC8.41□□□□□ -1.06
TOP2AP11388 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TOP2AP11388 AC079777.1-201ENST00000623836 1953 ntBASIC8.4□□□□□ -1.06
TOP2AP11388 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TOP2AP11388 RNA5SP28-201ENST00000363841 119 ntBASIC8.4□□□□□ -1.06
TOP2AP11388 ARL4AP5-201ENST00000404372 599 ntBASIC8.4□□□□□ -1.06
TOP2AP11388 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC8.4□□□□□ -1.06
TOP2AP11388 AC073358.1-201ENST00000505671 684 ntBASIC8.4□□□□□ -1.06
TOP2AP11388 AC026402.1-201ENST00000513642 170 ntBASIC8.4□□□□□ -1.06
TOP2AP11388 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC8.4□□□□□ -1.06
TOP2AP11388 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC8.4□□□□□ -1.06
TOP2AP11388 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TOP2AP11388 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TOP2AP11388 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TOP2AP11388 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TOP2AP11388 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
TOP2AP11388 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC8.4□□□□□ -1.07
TOP2AP11388 OR14L1P-202ENST00000641545 3009 ntBASIC8.4□□□□□ -1.07
TOP2AP11388 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC8.4□□□□□ -1.07
TOP2AP11388 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC8.4□□□□□ -1.07
TOP2AP11388 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.4□□□□□ -1.07
TOP2AP11388 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.4□□□□□ -1.07
TOP2AP11388 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TOP2AP11388 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC8.39□□□□□ -1.07
TOP2AP11388 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
TOP2AP11388 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC8.39□□□□□ -1.07
TOP2AP11388 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC8.39□□□□□ -1.07
TOP2AP11388 MTND2P28-201ENST00000457540 1044 ntBASIC8.39□□□□□ -1.07
TOP2AP11388 AC093824.1-201ENST00000508796 343 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms