Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.15□□□□□ -1.59
CAPN1P07384 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.15□□□□□ -1.59
CAPN1P07384 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.15□□□□□ -1.59
CAPN1P07384 SNORD39.2-201ENST00000579995 76 ntBASIC5.15□□□□□ -1.59
CAPN1P07384 AC060766.1-201ENST00000590824 627 ntBASIC5.15□□□□□ -1.59
CAPN1P07384 AL445222.1-201ENST00000607259 628 ntBASIC5.15□□□□□ -1.59
CAPN1P07384 AC118658.2-201ENST00000618697 459 ntBASIC5.15□□□□□ -1.59
CAPN1P07384 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CAPN1P07384 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CAPN1P07384 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CAPN1P07384 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CAPN1P07384 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CAPN1P07384 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.15□□□□□ -1.59
CAPN1P07384 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CAPN1P07384 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CAPN1P07384 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.14□□□□□ -1.59
CAPN1P07384 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.14□□□□□ -1.59
CAPN1P07384 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CAPN1P07384 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CAPN1P07384 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CAPN1P07384 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CAPN1P07384 Y_RNA.62-201ENST00000362840 99 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 U8.4-201ENST00000363626 134 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 SNORA74A-201ENST00000364089 198 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CAPN1P07384 RNU6-729P-201ENST00000384399 107 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CAPN1P07384 COX5BP7-201ENST00000414780 274 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 RPL23AP27-201ENST00000415161 451 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CAPN1P07384 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CAPN1P07384 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.14□□□□□ -1.59
CAPN1P07384 UBE2V2P1-201ENST00000434717 398 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 CLUHP1-201ENST00000435012 1190 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 GAPDHP25-201ENST00000447061 1001 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 NOP56P2-201ENST00000447491 769 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 RBMY2TP-201ENST00000451162 947 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 AURKAPS1-201ENST00000451805 1212 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.14□□□□□ -1.59
CAPN1P07384 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.14□□□□□ -1.59
CAPN1P07384 RN7SL423P-201ENST00000486202 304 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 RN7SL814P-201ENST00000487715 300 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.14□□□□□ -1.59
CAPN1P07384 NDUFA5P12-201ENST00000503796 343 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.14□□□□□ -1.59
CAPN1P07384 AC113398.2-201ENST00000507630 558 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.14□□□□□ -1.59
CAPN1P07384 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.14□□□□□ -1.59
CAPN1P07384 RNU6-941P-201ENST00000516346 108 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.14□□□□□ -1.59
CAPN1P07384 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.14□□□□□ -1.59
CAPN1P07384 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.14□□□□□ -1.59
CAPN1P07384 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.14□□□□□ -1.59
CAPN1P07384 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.14□□□□□ -1.59
CAPN1P07384 AC040958.1-201ENST00000561102 201 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.14□□□□□ -1.59
CAPN1P07384 AL390726.5-202ENST00000564800 256 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.14□□□□□ -1.59
CAPN1P07384 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.14□□□□□ -1.59
CAPN1P07384 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.14□□□□□ -1.59
CAPN1P07384 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.14□□□□□ -1.59
CAPN1P07384 AL159169.2-201ENST00000610061 1269 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CAPN1P07384 AC126915.2-201ENST00000610957 190 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 TMEM30CP-203ENST00000637814 1035 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
CAPN1P07384 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CAPN1P07384 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.14□□□□□ -1.59
CAPN1P07384 OR55B1P-203ENST00000641518 2602 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.14□□□□□ -1.59
CAPN1P07384 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CAPN1P07384 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CAPN1P07384 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.14□□□□□ -1.59
CAPN1P07384 TRIM51GP-201ENST00000534741 1350 ntBASIC5.14□□□□□ -1.59
CAPN1P07384 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CAPN1P07384 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CAPN1P07384 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CAPN1P07384 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.13□□□□□ -1.59
CAPN1P07384 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CAPN1P07384 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.13□□□□□ -1.59
CAPN1P07384 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CAPN1P07384 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CAPN1P07384 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
CAPN1P07384 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CAPN1P07384 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CAPN1P07384 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CAPN1P07384 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CAPN1P07384 MIR589-201ENST00000385238 99 ntBASIC5.13□□□□□ -1.59
CAPN1P07384 AL645927.1-201ENST00000396783 406 ntBASIC5.13□□□□□ -1.59
CAPN1P07384 HSPA8P15-201ENST00000401676 786 ntBASIC5.13□□□□□ -1.59
CAPN1P07384 RPL21P67-201ENST00000402896 478 ntBASIC5.13□□□□□ -1.59
CAPN1P07384 OR4K12P-201ENST00000406538 961 ntBASIC5.13□□□□□ -1.59
CAPN1P07384 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.13□□□□□ -1.59
CAPN1P07384 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CAPN1P07384 AL121578.1-201ENST00000428051 892 ntBASIC5.13□□□□□ -1.59
CAPN1P07384 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.13□□□□□ -1.59
CAPN1P07384 RN7SL610P-201ENST00000463845 291 ntBASIC5.13□□□□□ -1.59
CAPN1P07384 BX284632.1-201ENST00000478218 541 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms