Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 NIFKP3-201ENST00000417799 865 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 MTND2P9-201ENST00000422293 931 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 AL445528.1-201ENST00000426330 420 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 RPL35AP21-201ENST00000437667 333 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.01□□□□□ -1.61
CLPTM1O96005 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AL358876.1-201ENST00000453364 1075 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 RPL15P21-201ENST00000495592 567 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 PSMA2P2-201ENST00000504319 686 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AC073358.1-201ENST00000505671 684 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.01□□□□□ -1.61
CLPTM1O96005 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLPTM1O96005 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CLPTM1O96005 RNU6-760P-201ENST00000516078 97 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.01□□□□□ -1.61
CLPTM1O96005 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AC008521.2-201ENST00000591021 259 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 AC105148.1-201ENST00000604961 409 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 TAS2R6P-201ENST00000605022 826 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AL158062.1-201ENST00000619632 745 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AC006453.5-201ENST00000636451 619 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLPTM1O96005 AP001273.1-201ENST00000624493 3152 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLPTM1O96005 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLPTM1O96005 BRAFP1-201ENST00000445336 2703 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CLPTM1O96005 AC079298.1-201ENST00000625026 1619 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 PWAR1-201ENST00000624188 2414 ntBASIC5.01□□□□□ -1.61
CLPTM1O96005 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLPTM1O96005 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5□□□□□ -1.61
CLPTM1O96005 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5□□□□□ -1.61
CLPTM1O96005 AL034370.1-201ENST00000397254 1590 ntBASIC5□□□□□ -1.61
CLPTM1O96005 AC107021.2-201ENST00000567714 2095 ntBASIC5□□□□□ -1.61
CLPTM1O96005 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5□□□□□ -1.61
CLPTM1O96005 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CLPTM1O96005 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLPTM1O96005 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLPTM1O96005 RNU6-1176P-201ENST00000390955 107 ntBASIC5□□□□□ -1.61
CLPTM1O96005 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 CDY17P-201ENST00000414121 1282 ntBASIC5□□□□□ -1.61
CLPTM1O96005 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5□□□□□ -1.61
CLPTM1O96005 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5□□□□□ -1.61
CLPTM1O96005 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 GAPDHP48-201ENST00000436626 961 ntBASIC5□□□□□ -1.61
CLPTM1O96005 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLPTM1O96005 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 MTND2P25-201ENST00000449028 610 ntBASIC5□□□□□ -1.61
CLPTM1O96005 AL353718.1-201ENST00000451028 517 ntBASIC5□□□□□ -1.61
CLPTM1O96005 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLPTM1O96005 AC112206.1-201ENST00000468416 477 ntBASIC5□□□□□ -1.61
CLPTM1O96005 CBX1P5-201ENST00000475330 559 ntBASIC5□□□□□ -1.61
CLPTM1O96005 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5□□□□□ -1.61
CLPTM1O96005 ARL4AP1-201ENST00000503220 705 ntBASIC5□□□□□ -1.61
CLPTM1O96005 MTND3P24-201ENST00000506306 329 ntBASIC5□□□□□ -1.61
CLPTM1O96005 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLPTM1O96005 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 AC022826.1-201ENST00000519383 805 ntBASIC5□□□□□ -1.61
CLPTM1O96005 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 AC018442.3-201ENST00000523025 183 ntBASIC5□□□□□ -1.61
CLPTM1O96005 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5□□□□□ -1.61
CLPTM1O96005 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5□□□□□ -1.61
CLPTM1O96005 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5□□□□□ -1.61
CLPTM1O96005 MIR4310-201ENST00000582950 57 ntBASIC5□□□□□ -1.61
CLPTM1O96005 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5□□□□□ -1.61
CLPTM1O96005 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5□□□□□ -1.61
CLPTM1O96005 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5□□□□□ -1.61
CLPTM1O96005 AC098483.2-201ENST00000603158 454 ntBASIC5□□□□□ -1.61
CLPTM1O96005 OR4H6P-202ENST00000603819 340 ntBASIC5□□□□□ -1.61
CLPTM1O96005 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5□□□□□ -1.61
CLPTM1O96005 AL356752.1-201ENST00000615844 593 ntBASIC5□□□□□ -1.61
CLPTM1O96005 MIR8069-1-201ENST00000616627 86 ntBASIC5□□□□□ -1.61
CLPTM1O96005 MIR8069-2-201ENST00000621412 86 ntBASIC5□□□□□ -1.61
CLPTM1O96005 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5□□□□□ -1.61
CLPTM1O96005 AC106858.1-201ENST00000637497 429 ntBASIC5□□□□□ -1.61
CLPTM1O96005 AC073869.8-201ENST00000641806 335 ntBASIC5□□□□□ -1.61
CLPTM1O96005 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CLPTM1O96005 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CLPTM1O96005 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CLPTM1O96005 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLPTM1O96005 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLPTM1O96005 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLPTM1O96005 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms