Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC8.1□□□□□ -1.11
RNF40O75150 AC009237.9-201ENST00000414800 347 ntBASIC8.1□□□□□ -1.11
RNF40O75150 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RNF40O75150 GAPDHP49-201ENST00000421421 961 ntBASIC8.1□□□□□ -1.11
RNF40O75150 NPM1P34-201ENST00000428821 893 ntBASIC8.1□□□□□ -1.11
RNF40O75150 RPSAP62-201ENST00000432596 833 ntBASIC8.1□□□□□ -1.11
RNF40O75150 AL954705.1-201ENST00000435277 559 ntBASIC8.1□□□□□ -1.11
RNF40O75150 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC8.1□□□□□ -1.11
RNF40O75150 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC8.1□□□□□ -1.11
RNF40O75150 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC8.1□□□□□ -1.11
RNF40O75150 AC104306.1-201ENST00000449702 371 ntBASIC8.1□□□□□ -1.11
RNF40O75150 HIGD1AP16-201ENST00000450986 258 ntBASIC8.1□□□□□ -1.11
RNF40O75150 RNU6-261P-201ENST00000459506 102 ntBASIC8.1□□□□□ -1.11
RNF40O75150 RPS18P13-201ENST00000461260 454 ntBASIC8.1□□□□□ -1.11
RNF40O75150 AL122013.1-201ENST00000473054 801 ntBASIC8.1□□□□□ -1.11
RNF40O75150 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC8.1□□□□□ -1.11
RNF40O75150 AC011352.2-201ENST00000514574 1016 ntBASIC8.1□□□□□ -1.11
RNF40O75150 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC8.1□□□□□ -1.11
RNF40O75150 RNA5SP75-201ENST00000516841 111 ntBASIC8.1□□□□□ -1.11
RNF40O75150 AP005902.1-201ENST00000521358 186 ntBASIC8.1□□□□□ -1.11
RNF40O75150 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC8.1□□□□□ -1.11
RNF40O75150 SLC2A13P1-201ENST00000531560 322 ntBASIC8.1□□□□□ -1.11
RNF40O75150 AC068587.4-201ENST00000533893 186 ntBASIC8.1□□□□□ -1.11
RNF40O75150 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC8.1□□□□□ -1.11
RNF40O75150 NANOGNBP2-201ENST00000544753 553 ntBASIC8.1□□□□□ -1.11
RNF40O75150 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.1□□□□□ -1.11
RNF40O75150 SUB1P2-201ENST00000556401 297 ntBASIC8.1□□□□□ -1.11
RNF40O75150 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC8.1□□□□□ -1.11
RNF40O75150 AC012488.1-201ENST00000611221 640 ntBASIC8.1□□□□□ -1.11
RNF40O75150 TUG1_3.1-201ENST00000616187 237 ntBASIC8.1□□□□□ -1.11
RNF40O75150 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF40O75150 HBG1-202ENST00000632727 369 ntTSL 3 BASIC8.1□□□□□ -1.11
RNF40O75150 U6.107-201ENST00000637108 79 ntBASIC8.1□□□□□ -1.11
RNF40O75150 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF40O75150 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF40O75150 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF40O75150 AC241584.2-201ENST00000637142 2090 ntBASIC8.1□□□□□ -1.11
RNF40O75150 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RNF40O75150 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.1□□□□□ -1.11
RNF40O75150 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF40O75150 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
RNF40O75150 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF40O75150 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.1□□□□□ -1.11
RNF40O75150 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC8.1□□□□□ -1.11
RNF40O75150 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF40O75150 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RNF40O75150 CCDC162P-202ENST00000368966 6751 ntBASIC8.1□□□□□ -1.11
RNF40O75150 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
RNF40O75150 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
RNF40O75150 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.09□□□□□ -1.11
RNF40O75150 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF40O75150 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
RNF40O75150 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF40O75150 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RNF40O75150 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF40O75150 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RNF40O75150 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF40O75150 GNG5P1-201ENST00000255500 204 ntBASIC8.09□□□□□ -1.11
RNF40O75150 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RNF40O75150 RNU1-35P-201ENST00000362782 153 ntBASIC8.09□□□□□ -1.11
RNF40O75150 RNU6-1339P-201ENST00000363574 91 ntBASIC8.09□□□□□ -1.11
RNF40O75150 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
RNF40O75150 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RNF40O75150 AC068050.1-201ENST00000394891 380 ntBASIC8.09□□□□□ -1.11
RNF40O75150 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF40O75150 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF40O75150 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF40O75150 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF40O75150 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC8.09□□□□□ -1.11
RNF40O75150 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RNF40O75150 CACYBPP1-201ENST00000438592 684 ntBASIC8.09□□□□□ -1.11
RNF40O75150 AC108039.2-201ENST00000440214 359 ntBASIC8.09□□□□□ -1.11
RNF40O75150 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.09□□□□□ -1.11
RNF40O75150 AL606490.1-201ENST00000452266 765 ntBASIC8.09□□□□□ -1.11
RNF40O75150 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF40O75150 RNU6-329P-201ENST00000459618 107 ntBASIC8.09□□□□□ -1.11
RNF40O75150 AL590326.1-201ENST00000460857 334 ntBASIC8.09□□□□□ -1.11
RNF40O75150 RN7SL414P-201ENST00000469545 294 ntBASIC8.09□□□□□ -1.11
RNF40O75150 HMGB1P30-201ENST00000492455 606 ntBASIC8.09□□□□□ -1.11
RNF40O75150 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC8.09□□□□□ -1.11
RNF40O75150 OR7E99P-201ENST00000505750 922 ntBASIC8.09□□□□□ -1.11
RNF40O75150 AC138409.2-202ENST00000507274 458 ntBASIC8.09□□□□□ -1.11
RNF40O75150 HMGB3P15-201ENST00000507326 574 ntBASIC8.09□□□□□ -1.11
RNF40O75150 HMGB1P28-201ENST00000507778 552 ntBASIC8.09□□□□□ -1.11
RNF40O75150 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC8.09□□□□□ -1.11
RNF40O75150 COPS8P3-201ENST00000526024 482 ntBASIC8.09□□□□□ -1.11
RNF40O75150 DEFB131D-201ENST00000526803 184 ntBASIC8.09□□□□□ -1.11
RNF40O75150 MRPL40P1-201ENST00000542687 604 ntBASIC8.09□□□□□ -1.11
RNF40O75150 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF40O75150 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF40O75150 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF40O75150 AC138915.2-201ENST00000569776 97 ntBASIC8.09□□□□□ -1.11
RNF40O75150 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF40O75150 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF40O75150 AC129492.5-201ENST00000603489 315 ntBASIC8.09□□□□□ -1.11
RNF40O75150 AL133351.5-201ENST00000612789 106 ntBASIC8.09□□□□□ -1.11
RNF40O75150 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC8.09□□□□□ -1.11
RNF40O75150 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF40O75150 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF40O75150 ZNF519P1-201ENST00000449011 1626 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms