Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5□□□□□ -1.61
SSX4O60224 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSX4O60224 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSX4O60224 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX4O60224 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX4O60224 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX4O60224 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.99□□□□□ -1.61
SSX4O60224 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX4O60224 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SSX4O60224 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX4O60224 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX4O60224 AL359715.3-201ENST00000569267 2123 ntBASIC4.99□□□□□ -1.61
SSX4O60224 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX4O60224 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.99□□□□□ -1.61
SSX4O60224 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX4O60224 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX4O60224 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSX4O60224 AC007342.7-201ENST00000624610 2337 ntBASIC4.99□□□□□ -1.61
SSX4O60224 RN7SKP160-201ENST00000363804 340 ntBASIC4.99□□□□□ -1.61
SSX4O60224 RNA5SP394-201ENST00000364216 119 ntBASIC4.99□□□□□ -1.61
SSX4O60224 RNA5SP500-201ENST00000364486 119 ntBASIC4.99□□□□□ -1.61
SSX4O60224 MIR1178-201ENST00000408396 91 ntBASIC4.99□□□□□ -1.61
SSX4O60224 BX510359.3-201ENST00000422168 306 ntBASIC4.99□□□□□ -1.61
SSX4O60224 HMGB3P24-201ENST00000433260 622 ntBASIC4.99□□□□□ -1.61
SSX4O60224 AL445928.1-201ENST00000435545 222 ntBASIC4.99□□□□□ -1.61
SSX4O60224 SCAND3P1-201ENST00000439854 1060 ntBASIC4.99□□□□□ -1.61
SSX4O60224 RPS7P3-201ENST00000443360 580 ntBASIC4.99□□□□□ -1.61
SSX4O60224 AC012512.1-201ENST00000446594 718 ntBASIC4.99□□□□□ -1.61
SSX4O60224 RPL23AP23-201ENST00000452590 471 ntBASIC4.99□□□□□ -1.61
SSX4O60224 AC026348.1-201ENST00000462549 1053 ntBASIC4.99□□□□□ -1.61
SSX4O60224 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX4O60224 RN7SL205P-201ENST00000490174 284 ntBASIC4.99□□□□□ -1.61
SSX4O60224 AC104629.1-201ENST00000494226 508 ntBASIC4.99□□□□□ -1.61
SSX4O60224 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX4O60224 CDH12P2-201ENST00000504393 298 ntBASIC4.99□□□□□ -1.61
SSX4O60224 AC008638.1-201ENST00000506035 866 ntBASIC4.99□□□□□ -1.61
SSX4O60224 SNORA43.3-201ENST00000517240 103 ntBASIC4.99□□□□□ -1.61
SSX4O60224 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX4O60224 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX4O60224 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX4O60224 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX4O60224 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX4O60224 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.99□□□□□ -1.61
SSX4O60224 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX4O60224 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX4O60224 RN7SL290P-201ENST00000578661 300 ntBASIC4.99□□□□□ -1.61
SSX4O60224 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.99□□□□□ -1.61
SSX4O60224 MIR4472-2-201ENST00000582069 67 ntBASIC4.99□□□□□ -1.61
SSX4O60224 CBX3P2-202ENST00000583365 535 ntBASIC4.99□□□□□ -1.61
SSX4O60224 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX4O60224 AL139099.4-201ENST00000614802 114 ntBASIC4.99□□□□□ -1.61
SSX4O60224 AL122125.1-201ENST00000616999 600 ntBASIC4.99□□□□□ -1.61
SSX4O60224 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX4O60224 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX4O60224 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.99□□□□□ -1.61
SSX4O60224 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.99□□□□□ -1.61
SSX4O60224 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SSX4O60224 TCP1P3-201ENST00000414406 1498 ntBASIC4.99□□□□□ -1.61
SSX4O60224 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSX4O60224 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.98□□□□□ -1.61
SSX4O60224 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX4O60224 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX4O60224 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX4O60224 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SSX4O60224 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX4O60224 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX4O60224 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX4O60224 RNA5SP46-201ENST00000362370 120 ntBASIC4.98□□□□□ -1.61
SSX4O60224 RNA5SP326-201ENST00000363209 110 ntBASIC4.98□□□□□ -1.61
SSX4O60224 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSX4O60224 RPL5P19-201ENST00000404228 893 ntBASIC4.98□□□□□ -1.61
SSX4O60224 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSX4O60224 MRPL53P1-201ENST00000414323 319 ntBASIC4.98□□□□□ -1.61
SSX4O60224 AL662874.1-201ENST00000426065 230 ntBASIC4.98□□□□□ -1.61
SSX4O60224 AC127526.2-201ENST00000426436 775 ntBASIC4.98□□□□□ -1.61
SSX4O60224 UBE2D3P3-201ENST00000426992 425 ntBASIC4.98□□□□□ -1.61
SSX4O60224 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX4O60224 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX4O60224 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX4O60224 MTCYBP12-201ENST00000440559 1134 ntBASIC4.98□□□□□ -1.61
SSX4O60224 MTCYBP21-201ENST00000443300 1113 ntBASIC4.98□□□□□ -1.61
SSX4O60224 AC023512.1-201ENST00000444513 499 ntBASIC4.98□□□□□ -1.61
SSX4O60224 LINC02210-201ENST00000444561 288 ntBASIC4.98□□□□□ -1.61
SSX4O60224 AC073909.1-201ENST00000447112 999 ntBASIC4.98□□□□□ -1.61
SSX4O60224 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX4O60224 PSMC1P13-201ENST00000458195 985 ntBASIC4.98□□□□□ -1.61
SSX4O60224 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX4O60224 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX4O60224 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX4O60224 AC074087.1-201ENST00000512059 724 ntBASIC4.98□□□□□ -1.61
SSX4O60224 RNU6-1308P-201ENST00000516817 103 ntBASIC4.98□□□□□ -1.61
SSX4O60224 IGKV2-18-201ENST00000522607 343 ntBASIC4.98□□□□□ -1.61
SSX4O60224 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX4O60224 AC137627.1-201ENST00000545761 289 ntBASIC4.98□□□□□ -1.61
SSX4O60224 MIR1273E-201ENST00000581165 102 ntBASIC4.98□□□□□ -1.61
SSX4O60224 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.98□□□□□ -1.61
SSX4O60224 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.98□□□□□ -1.61
SSX4O60224 AC006272.2-201ENST00000594725 163 ntBASIC4.98□□□□□ -1.61
SSX4O60224 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.98□□□□□ -1.61
SSX4O60224 AC120053.1-201ENST00000607706 736 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms