Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC104118.1-201ENST00000607625 1589 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RIPK2O43353 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIPK2O43353 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RIPK2O43353 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RIPK2O43353 RNA5SP335-201ENST00000363817 110 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 RNA5SP234-201ENST00000363916 119 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.18□□□□□ -1.58
RIPK2O43353 SNORA2.3-201ENST00000383920 135 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RIPK2O43353 OOSP1-201ENST00000398992 1270 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.18□□□□□ -1.58
RIPK2O43353 RPS29P10-201ENST00000439197 166 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 CASP3P1-201ENST00000446037 609 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.18□□□□□ -1.58
RIPK2O43353 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.18□□□□□ -1.58
RIPK2O43353 AC004980.3-201ENST00000447046 365 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.18□□□□□ -1.58
RIPK2O43353 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 AC112206.1-201ENST00000468416 477 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 SIAH1P1-201ENST00000479411 923 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.18□□□□□ -1.58
RIPK2O43353 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RIPK2O43353 RN7SKP46-201ENST00000515942 234 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.18□□□□□ -1.58
RIPK2O43353 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RIPK2O43353 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.18□□□□□ -1.58
RIPK2O43353 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.18□□□□□ -1.58
RIPK2O43353 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIPK2O43353 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.18□□□□□ -1.58
RIPK2O43353 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIPK2O43353 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIPK2O43353 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIPK2O43353 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.18□□□□□ -1.58
RIPK2O43353 AC068446.1-201ENST00000556425 1549 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RIPK2O43353 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RIPK2O43353 AC091305.2-201ENST00000624049 1576 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RIPK2O43353 AC092079.1-201ENST00000558620 1985 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
RIPK2O43353 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.17□□□□□ -1.58
RIPK2O43353 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RIPK2O43353 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.17□□□□□ -1.58
RIPK2O43353 EIF4A1P1-201ENST00000420241 934 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 AL590609.2-201ENST00000421430 368 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 ARAFP1-201ENST00000422172 605 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 TNPO1P1-201ENST00000423641 1138 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 HSPE1P16-201ENST00000426640 348 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.17□□□□□ -1.58
RIPK2O43353 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RIPK2O43353 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.17□□□□□ -1.58
RIPK2O43353 AL445433.1-201ENST00000457507 257 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.17□□□□□ -1.58
RIPK2O43353 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.17□□□□□ -1.58
RIPK2O43353 AC020890.1-201ENST00000491837 504 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 AC073358.1-201ENST00000505671 684 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.17□□□□□ -1.58
RIPK2O43353 BTG4P1-201ENST00000510421 183 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.17□□□□□ -1.58
RIPK2O43353 RNA5SP464-201ENST00000516251 108 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 RN7SKP183-201ENST00000517169 324 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 AC012400.1-201ENST00000518452 381 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.17□□□□□ -1.58
RIPK2O43353 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.17□□□□□ -1.58
RIPK2O43353 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.17□□□□□ -1.58
RIPK2O43353 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RIPK2O43353 RPL10P14-201ENST00000565265 298 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.17□□□□□ -1.58
RIPK2O43353 CYCSP40-201ENST00000575927 294 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.17□□□□□ -1.58
RIPK2O43353 DPRXP4-201ENST00000578053 568 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.17□□□□□ -1.58
RIPK2O43353 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.17□□□□□ -1.58
RIPK2O43353 RNF138P2-201ENST00000603490 592 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 AC012213.4-201ENST00000606457 354 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 NF1P10-201ENST00000613227 742 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 AC015908.5-201ENST00000623289 343 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RIPK2O43353 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.17□□□□□ -1.58
RIPK2O43353 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RIPK2O43353 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.17□□□□□ -1.58
RIPK2O43353 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RIPK2O43353 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RIPK2O43353 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RIPK2O43353 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RIPK2O43353 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.17□□□□□ -1.58
RIPK2O43353 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RIPK2O43353 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIPK2O43353 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIPK2O43353 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIPK2O43353 OR55B1P-203ENST00000641518 2602 ntBASIC5.16□□□□□ -1.58
RIPK2O43353 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIPK2O43353 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIPK2O43353 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.16□□□□□ -1.58
RIPK2O43353 RNA5SP122-201ENST00000384457 108 ntBASIC5.16□□□□□ -1.58
RIPK2O43353 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RIPK2O43353 RNU2-50P-201ENST00000410494 143 ntBASIC5.16□□□□□ -1.58
RIPK2O43353 RN7SKP286-201ENST00000410894 299 ntBASIC5.16□□□□□ -1.58
RIPK2O43353 TRIM60P17-201ENST00000415181 719 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms