Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM38O00635 RNU6-666P-201ENST00000363499 107 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 SNORD56.4-201ENST00000363883 71 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM38O00635 RNU6-532P-201ENST00000384318 107 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM38O00635 OR2AT2P-201ENST00000413438 905 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM38O00635 EIF4A1P1-201ENST00000420241 934 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM38O00635 AC013262.1-201ENST00000426710 252 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 AC006994.1-201ENST00000438212 839 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM38O00635 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM38O00635 EEF1B2P6-201ENST00000445713 673 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 AC092685.1-201ENST00000447960 1243 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 LRRC37A14P-201ENST00000452297 462 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 AC104164.1-201ENST00000460282 590 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM38O00635 AC026348.1-201ENST00000462549 1053 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 RPS23P6-201ENST00000466136 431 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM38O00635 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM38O00635 RPS17P11-201ENST00000474297 293 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 RPS3AP6-201ENST00000484430 795 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM38O00635 GAPDHP71-201ENST00000511530 1003 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 AC118465.1-201ENST00000513820 1271 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM38O00635 Y_RNA.717-201ENST00000517106 92 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM38O00635 AP001636.2-201ENST00000525517 696 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.77□□□□□ -1.49
TRIM38O00635 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM38O00635 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM38O00635 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM38O00635 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM38O00635 AC119403.2-201ENST00000590960 598 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM38O00635 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM38O00635 AC245100.7-201ENST00000609678 442 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM38O00635 AL445670.1-201ENST00000618889 801 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 AC145207.9-201ENST00000623802 325 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 AL109659.3-201ENST00000624985 950 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM38O00635 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM38O00635 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM38O00635 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM38O00635 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM38O00635 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM38O00635 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TRIM38O00635 MTND5P31-201ENST00000419366 1374 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM38O00635 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM38O00635 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM38O00635 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM38O00635 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
TRIM38O00635 ADAM24P-201ENST00000398655 2101 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 AP001284.1-201ENST00000528393 2118 ntBASIC5.77□□□□□ -1.49
TRIM38O00635 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM38O00635 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM38O00635 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 FBXL21-201ENST00000297158 1305 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
TRIM38O00635 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TRIM38O00635 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TRIM38O00635 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM38O00635 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM38O00635 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
TRIM38O00635 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
TRIM38O00635 MTCO1P7-201ENST00000419523 1542 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM38O00635 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 OR9K1P-201ENST00000326513 941 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 RPL22P22-201ENST00000395439 379 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 AP002784.2-201ENST00000397300 549 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 RPS27AP11-201ENST00000402798 447 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 AL355615.1-201ENST00000406187 641 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 RN7SKP29-201ENST00000410957 272 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 LUZP4P1-201ENST00000415420 344 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 HSFY4P-201ENST00000415994 1181 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 BMS1P17-202ENST00000416720 316 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 AC008173.1-201ENST00000418901 264 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 AK4P4-201ENST00000419465 646 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.76□□□□□ -1.49
TRIM38O00635 AL355433.1-201ENST00000422804 300 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM38O00635 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.76□□□□□ -1.49
TRIM38O00635 HMGB3P24-201ENST00000433260 622 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 AC138761.5-201ENST00000433967 325 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 YWHAZP2-201ENST00000440317 728 ntBASIC5.76□□□□□ -1.49
TRIM38O00635 AC044797.1-201ENST00000445744 679 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms