Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RN7SL101P-201ENST00000496350 279 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 AC073358.1-201ENST00000505671 684 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 AC106872.4-201ENST00000510050 523 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 EIF4A2P5-201ENST00000529914 499 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 AC004825.1-201ENST00000555068 586 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.2□□□□□ -1.74
SDCBPO00560 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SDCBPO00560 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.2□□□□□ -1.74
SDCBPO00560 AC095055.1-201ENST00000603472 1113 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 AL512329.2-201ENST00000607350 548 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 RPSAP73-201ENST00000614820 330 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 AC099654.11-201ENST00000638857 294 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
SDCBPO00560 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SDCBPO00560 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SDCBPO00560 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.2□□□□□ -1.74
SDCBPO00560 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
SDCBPO00560 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
SDCBPO00560 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.19□□□□□ -1.74
SDCBPO00560 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDCBPO00560 MAPK10-320ENST00000641462 6696 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDCBPO00560 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDCBPO00560 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SDCBPO00560 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDCBPO00560 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.19□□□□□ -1.74
SDCBPO00560 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
SDCBPO00560 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SDCBPO00560 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDCBPO00560 LRRC37BP1-201ENST00000398851 714 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 DUTP5-201ENST00000406790 469 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 NACAP7-201ENST00000407371 609 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.19□□□□□ -1.74
SDCBPO00560 BX323845.1-201ENST00000432417 179 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.19□□□□□ -1.74
SDCBPO00560 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.19□□□□□ -1.74
SDCBPO00560 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.19□□□□□ -1.74
SDCBPO00560 RHEBP2-201ENST00000450289 600 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 HMGB1P4-201ENST00000455362 567 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 AC011225.1-201ENST00000457751 369 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.19□□□□□ -1.74
SDCBPO00560 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.19□□□□□ -1.74
SDCBPO00560 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.19□□□□□ -1.74
SDCBPO00560 RN7SL799P-201ENST00000475891 298 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 RPS21P4-201ENST00000487122 248 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 AC024558.1-201ENST00000505008 528 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 BTG4P1-201ENST00000510421 183 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.19□□□□□ -1.74
SDCBPO00560 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.19□□□□□ -1.74
SDCBPO00560 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.19□□□□□ -1.74
SDCBPO00560 AL512310.9-201ENST00000553311 948 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.19□□□□□ -1.74
SDCBPO00560 IMMP1LP3-201ENST00000604197 224 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 AP000864.1-201ENST00000609424 650 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 AL139407.1-201ENST00000613826 1175 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SDCBPO00560 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDCBPO00560 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SDCBPO00560 PANDAR-201ENST00000629595 1506 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
SDCBPO00560 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.19□□□□□ -1.74
SDCBPO00560 AL449283.1-201ENST00000602631 3403 ntBASIC4.19□□□□□ -1.74
SDCBPO00560 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SDCBPO00560 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.19□□□□□ -1.74
SDCBPO00560 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.19□□□□□ -1.74
SDCBPO00560 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
SDCBPO00560 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDCBPO00560 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.18□□□□□ -1.74
SDCBPO00560 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDCBPO00560 PROS2P-201ENST00000474651 1951 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
SDCBPO00560 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.18□□□□□ -1.74
SDCBPO00560 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SDCBPO00560 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDCBPO00560 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.18□□□□□ -1.74
SDCBPO00560 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SDCBPO00560 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SDCBPO00560 SNORA73.1-201ENST00000363107 205 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 SNORA70.10-201ENST00000384515 134 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 AL592291.1-201ENST00000403830 352 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 MIR1286-201ENST00000408112 78 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 RN7SKP114-201ENST00000410327 279 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 RN7SKP206-201ENST00000410823 293 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 AP000534.2-201ENST00000412729 568 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.18□□□□□ -1.74
SDCBPO00560 OR6C64P-201ENST00000419708 825 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 AC012519.1-201ENST00000424588 610 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 CKS1BP6-201ENST00000424932 240 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.18□□□□□ -1.74
SDCBPO00560 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.18□□□□□ -1.74
SDCBPO00560 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.18□□□□□ -1.74
SDCBPO00560 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SDCBPO00560 CYCSP34-201ENST00000458172 304 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.18□□□□□ -1.74
SDCBPO00560 AC020890.1-201ENST00000491837 504 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 ATP5LP3-201ENST00000514223 304 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 RN7SKP260-201ENST00000516907 149 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms