Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM1O00151 FGF7P3-201ENST00000454645 303 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 SETP20-201ENST00000457046 852 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 SCARNA10-201ENST00000459255 330 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 CBX1P5-201ENST00000475330 559 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM1O00151 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.02□□□□□ -1.61
PDLIM1O00151 AC138866.2-201ENST00000508650 584 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM1O00151 SNORA43.3-201ENST00000517240 103 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.02□□□□□ -1.61
PDLIM1O00151 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.02□□□□□ -1.61
PDLIM1O00151 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM1O00151 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.02□□□□□ -1.61
PDLIM1O00151 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.02□□□□□ -1.61
PDLIM1O00151 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.02□□□□□ -1.61
PDLIM1O00151 AL121873.1-201ENST00000616013 524 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM1O00151 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PDLIM1O00151 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
PDLIM1O00151 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PDLIM1O00151 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM1O00151 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PDLIM1O00151 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM1O00151 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PDLIM1O00151 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PDLIM1O00151 MRE11P1-201ENST00000464884 2127 ntBASIC5.02□□□□□ -1.61
PDLIM1O00151 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.02□□□□□ -1.61
PDLIM1O00151 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM1O00151 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM1O00151 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM1O00151 AC093775.1-201ENST00000624154 1868 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PDLIM1O00151 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM1O00151 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM1O00151 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM1O00151 MIR708-201ENST00000390708 88 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 AL512430.2-201ENST00000406786 339 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 RN7SKP293-201ENST00000411389 296 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM1O00151 NAP1L4P2-201ENST00000425958 899 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 AC005297.1-201ENST00000444765 862 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 AL121877.1-201ENST00000453704 622 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 AC007386.1-201ENST00000455212 582 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM1O00151 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM1O00151 AC090686.1-201ENST00000481577 749 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM1O00151 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM1O00151 RPEP1-201ENST00000504507 658 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM1O00151 MYL12AP1-201ENST00000518490 515 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM1O00151 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.01□□□□□ -1.61
PDLIM1O00151 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM1O00151 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM1O00151 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM1O00151 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.01□□□□□ -1.61
PDLIM1O00151 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.01□□□□□ -1.61
PDLIM1O00151 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM1O00151 GMCL1P2-201ENST00000605230 823 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM1O00151 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM1O00151 SNX18P1Y-201ENST00000616231 511 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 CU639417.4-201ENST00000623928 207 ntBASIC5.01□□□□□ -1.61
PDLIM1O00151 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM1O00151 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM1O00151 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM1O00151 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM1O00151 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM1O00151 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PDLIM1O00151 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM1O00151 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM1O00151 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM1O00151 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
PDLIM1O00151 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM1O00151 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM1O00151 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM1O00151 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM1O00151 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM1O00151 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM1O00151 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
PDLIM1O00151 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM1O00151 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM1O00151 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
PDLIM1O00151 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM1O00151 AC063976.2-201ENST00000425667 3556 ntBASIC5□□□□□ -1.61
PDLIM1O00151 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM1O00151 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
PDLIM1O00151 RNU1-19P-201ENST00000363306 165 ntBASIC5□□□□□ -1.61
PDLIM1O00151 RNU6-1331P-201ENST00000363658 106 ntBASIC5□□□□□ -1.61
PDLIM1O00151 RNA5SP435-201ENST00000364044 108 ntBASIC5□□□□□ -1.61
PDLIM1O00151 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM1O00151 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM1O00151 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM1O00151 AL512422.1-201ENST00000407033 553 ntBASIC5□□□□□ -1.61
PDLIM1O00151 RNA5SP178-201ENST00000410380 128 ntBASIC5□□□□□ -1.61
PDLIM1O00151 AC098592.2-201ENST00000413158 265 ntBASIC5□□□□□ -1.61
PDLIM1O00151 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM1O00151 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms