Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.14■■□□□ 1.14
PTCH2Q9Y6C5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
PTCH2Q9Y6C5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTCH2Q9Y6C5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
PTCH2Q9Y6C5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.14■■□□□ 1.13
PTCH2Q9Y6C5 CA15P1-201ENST00000481698 905 ntBASIC22.14■■□□□ 1.13
PTCH2Q9Y6C5 UNC93B7-201ENST00000509439 705 ntBASIC22.14■■□□□ 1.13
PTCH2Q9Y6C5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.14■■□□□ 1.13
PTCH2Q9Y6C5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTCH2Q9Y6C5 CKBP1-201ENST00000565489 1086 ntBASIC22.14■■□□□ 1.13
PTCH2Q9Y6C5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.14■■□□□ 1.13
PTCH2Q9Y6C5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTCH2Q9Y6C5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.14■■□□□ 1.13
PTCH2Q9Y6C5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.14■■□□□ 1.13
PTCH2Q9Y6C5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 STARP1-201ENST00000397973 869 ntBASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCH2Q9Y6C5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 SPDYE13P-201ENST00000445314 798 ntBASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 AC092329.2-201ENST00000598402 547 ntBASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 FBXW4P1-201ENST00000426721 2239 ntBASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.12■■□□□ 1.13
PTCH2Q9Y6C5 AC121338.2-201ENST00000622535 1744 ntBASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 FAAHP1-202ENST00000446499 1238 ntBASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 AL121603.2-201ENST00000557373 2117 ntBASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 AC079834.2-201ENST00000609776 1949 ntBASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCH2Q9Y6C5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.1■■□□□ 1.13
PTCH2Q9Y6C5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PTCH2Q9Y6C5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PTCH2Q9Y6C5 AP000523.1-201ENST00000398242 1049 ntBASIC22.1■■□□□ 1.13
PTCH2Q9Y6C5 SPDYE15P-201ENST00000424157 909 ntBASIC22.1■■□□□ 1.13
PTCH2Q9Y6C5 GCSHP2-201ENST00000560971 527 ntBASIC22.1■■□□□ 1.13
PTCH2Q9Y6C5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.1■■□□□ 1.13
PTCH2Q9Y6C5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.1■■□□□ 1.13
PTCH2Q9Y6C5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.1■■□□□ 1.13
PTCH2Q9Y6C5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC22.1■■□□□ 1.13
PTCH2Q9Y6C5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC22.1■■□□□ 1.13
PTCH2Q9Y6C5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PTCH2Q9Y6C5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PTCH2Q9Y6C5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PTCH2Q9Y6C5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
PTCH2Q9Y6C5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
PTCH2Q9Y6C5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PTCH2Q9Y6C5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
PTCH2Q9Y6C5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PTCH2Q9Y6C5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PTCH2Q9Y6C5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PTCH2Q9Y6C5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC22.08■■□□□ 1.13
PTCH2Q9Y6C5 AC009078.2-202ENST00000463353 338 ntBASIC22.08■■□□□ 1.13
PTCH2Q9Y6C5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC22.08■■□□□ 1.13
PTCH2Q9Y6C5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
PTCH2Q9Y6C5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PTCH2Q9Y6C5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms