Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
CHD7Q9P2D1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD7Q9P2D1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD7Q9P2D1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD7Q9P2D1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
CHD7Q9P2D1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD7Q9P2D1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD7Q9P2D1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.83■□□□□ 0.93
CHD7Q9P2D1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.83■□□□□ 0.92
CHD7Q9P2D1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.83■□□□□ 0.92
CHD7Q9P2D1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.83■□□□□ 0.92
CHD7Q9P2D1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
CHD7Q9P2D1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CHD7Q9P2D1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD7Q9P2D1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHD7Q9P2D1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 KRT8P41-201ENST00000533985 1514 ntBASIC20.82■□□□□ 0.92
CHD7Q9P2D1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 GCSHP2-201ENST00000560971 527 ntBASIC20.82■□□□□ 0.92
CHD7Q9P2D1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 AL136038.3-201ENST00000561909 1096 ntBASIC20.82■□□□□ 0.92
CHD7Q9P2D1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.82■□□□□ 0.92
CHD7Q9P2D1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD7Q9P2D1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CHD7Q9P2D1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD7Q9P2D1 AP000523.1-201ENST00000398242 1049 ntBASIC20.81■□□□□ 0.92
CHD7Q9P2D1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.81■□□□□ 0.92
CHD7Q9P2D1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.81■□□□□ 0.92
CHD7Q9P2D1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD7Q9P2D1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD7Q9P2D1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.81■□□□□ 0.92
CHD7Q9P2D1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.81■□□□□ 0.92
CHD7Q9P2D1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD7Q9P2D1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD7Q9P2D1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.81■□□□□ 0.92
CHD7Q9P2D1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD7Q9P2D1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHD7Q9P2D1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHD7Q9P2D1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHD7Q9P2D1 AL031432.5-201ENST00000641059 760 ntBASIC20.8■□□□□ 0.92
CHD7Q9P2D1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.8■□□□□ 0.92
CHD7Q9P2D1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.8■□□□□ 0.92
CHD7Q9P2D1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD7Q9P2D1 AC244015.2-201ENST00000616358 1861 ntBASIC20.8■□□□□ 0.92
CHD7Q9P2D1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.8■□□□□ 0.92
CHD7Q9P2D1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.8■□□□□ 0.92
CHD7Q9P2D1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.8■□□□□ 0.92
CHD7Q9P2D1 AC104692.2-201ENST00000603054 253 ntBASIC20.8■□□□□ 0.92
CHD7Q9P2D1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHD7Q9P2D1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.79■□□□□ 0.92
CHD7Q9P2D1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 FP700111.2-201ENST00000619190 1892 ntBASIC20.78■□□□□ 0.92
CHD7Q9P2D1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 AL732292.2-201ENST00000609649 430 ntBASIC20.78■□□□□ 0.92
CHD7Q9P2D1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD7Q9P2D1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms