Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH23Q9H251 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH23Q9H251 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH23Q9H251 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH23Q9H251 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH23Q9H251 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH23Q9H251 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH23Q9H251 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH23Q9H251 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH23Q9H251 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH23Q9H251 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH23Q9H251 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH23Q9H251 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDH23Q9H251 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.85■□□□□ 0.93
CDH23Q9H251 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDH23Q9H251 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDH23Q9H251 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH23Q9H251 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CDH23Q9H251 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.84■□□□□ 0.93
CDH23Q9H251 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CDH23Q9H251 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH23Q9H251 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.84■□□□□ 0.93
CDH23Q9H251 AP003041.3-201ENST00000527151 707 ntBASIC20.84■□□□□ 0.93
CDH23Q9H251 NEK4P2-201ENST00000580004 1012 ntBASIC20.84■□□□□ 0.93
CDH23Q9H251 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CDH23Q9H251 IFNL4P1-201ENST00000607083 540 ntBASIC20.84■□□□□ 0.93
CDH23Q9H251 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.84■□□□□ 0.93
CDH23Q9H251 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.84■□□□□ 0.93
CDH23Q9H251 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH23Q9H251 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.84■□□□□ 0.93
CDH23Q9H251 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.84■□□□□ 0.93
CDH23Q9H251 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH23Q9H251 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CDH23Q9H251 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH23Q9H251 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH23Q9H251 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH23Q9H251 AC233723.2-201ENST00000623798 2106 ntBASIC20.84■□□□□ 0.93
CDH23Q9H251 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH23Q9H251 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH23Q9H251 AP002383.4-201ENST00000442518 975 ntBASIC20.83■□□□□ 0.93
CDH23Q9H251 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDH23Q9H251 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDH23Q9H251 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CDH23Q9H251 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH23Q9H251 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.83■□□□□ 0.93
CDH23Q9H251 RNA5SP419-201ENST00000515908 135 ntBASIC20.83■□□□□ 0.93
CDH23Q9H251 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.83■□□□□ 0.93
CDH23Q9H251 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.83■□□□□ 0.93
CDH23Q9H251 TFP1-202ENST00000475455 1573 ntBASIC20.83■□□□□ 0.92
CDH23Q9H251 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.83■□□□□ 0.92
CDH23Q9H251 FBXW4P1-201ENST00000426721 2239 ntBASIC20.83■□□□□ 0.92
CDH23Q9H251 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH23Q9H251 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.83■□□□□ 0.92
CDH23Q9H251 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH23Q9H251 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.83■□□□□ 0.92
CDH23Q9H251 AC004951.3-201ENST00000418645 1148 ntBASIC20.83■□□□□ 0.92
CDH23Q9H251 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.83■□□□□ 0.92
CDH23Q9H251 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CDH23Q9H251 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.82■□□□□ 0.92
CDH23Q9H251 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.82■□□□□ 0.92
CDH23Q9H251 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH23Q9H251 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH23Q9H251 KRT18P1-202ENST00000452408 1331 ntBASIC20.82■□□□□ 0.92
CDH23Q9H251 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH23Q9H251 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH23Q9H251 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH23Q9H251 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH23Q9H251 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.82■□□□□ 0.92
CDH23Q9H251 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDH23Q9H251 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.82■□□□□ 0.92
CDH23Q9H251 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CDH23Q9H251 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH23Q9H251 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CDH23Q9H251 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH23Q9H251 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CDH23Q9H251 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CDH23Q9H251 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CDH23Q9H251 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH23Q9H251 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH23Q9H251 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.81■□□□□ 0.92
CDH23Q9H251 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.81■□□□□ 0.92
CDH23Q9H251 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH23Q9H251 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH23Q9H251 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDH23Q9H251 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH23Q9H251 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH23Q9H251 AC092329.2-201ENST00000598402 547 ntBASIC20.81■□□□□ 0.92
CDH23Q9H251 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH23Q9H251 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH23Q9H251 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.81■□□□□ 0.92
CDH23Q9H251 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CDH23Q9H251 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH23Q9H251 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDH23Q9H251 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH23Q9H251 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH23Q9H251 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH23Q9H251 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
CDH23Q9H251 HLA-A-209ENST00000638375 975 ntBASIC20.8■□□□□ 0.92
CDH23Q9H251 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CDH23Q9H251 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms