Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 AC098831.1-202ENST00000438821 336 ntBASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 TOB2P1-201ENST00000469761 992 ntBASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 AC138894.3-201ENST00000603787 634 ntBASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRFN3Q9BTN0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 AKR1C7P-201ENST00000305623 895 ntBASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.6■□□□□ 0.73
LRFN3Q9BTN0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 HLA-J-203ENST00000494367 1087 ntBASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 PGAM5P1-201ENST00000518923 814 ntBASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LRFN3Q9BTN0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRFN3Q9BTN0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRFN3Q9BTN0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.58■□□□□ 0.73
LRFN3Q9BTN0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRFN3Q9BTN0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRFN3Q9BTN0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRFN3Q9BTN0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRFN3Q9BTN0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 RPS8P6-201ENST00000426177 609 ntBASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 AC104819.1-201ENST00000504587 486 ntBASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.58■□□□□ 0.72
LRFN3Q9BTN0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 AL162741.1-201ENST00000565563 1558 ntBASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 AC093525.10-201ENST00000625130 1569 ntBASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 AC034232.1-201ENST00000506026 1064 ntBASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 TP73-AS1-207ENST00000624167 988 ntBASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.57■□□□□ 0.72
LRFN3Q9BTN0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms