Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 AC141257.4-201ENST00000634557 245 ntBASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 AC136944.6-201ENST00000634818 245 ntBASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 AP000550.4-202ENST00000639755 178 ntBASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 AL031432.5-201ENST00000641059 760 ntBASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM2D3Q9BRN9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 CA15P1-201ENST00000481698 905 ntBASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 AL353719.1-201ENST00000566847 864 ntBASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TM2D3Q9BRN9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
TM2D3Q9BRN9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
TM2D3Q9BRN9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 AF106564.1-201ENST00000607058 2553 ntBASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 HOMER2P1-201ENST00000455653 964 ntBASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 AL121956.5-201ENST00000625261 221 ntBASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.08□□□□□ -0.16
TM2D3Q9BRN9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TM2D3Q9BRN9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms