Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 NBPF21P-201ENST00000425093 1451 ntBASIC19.03■□□□□ 0.64
PKP4Q99569 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PKP4Q99569 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.03■□□□□ 0.64
PKP4Q99569 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PKP4Q99569 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PKP4Q99569 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PKP4Q99569 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.03■□□□□ 0.64
PKP4Q99569 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.03■□□□□ 0.64
PKP4Q99569 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.03■□□□□ 0.64
PKP4Q99569 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.03■□□□□ 0.64
PKP4Q99569 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
PKP4Q99569 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PKP4Q99569 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
PKP4Q99569 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PKP4Q99569 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PKP4Q99569 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PKP4Q99569 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PKP4Q99569 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PKP4Q99569 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PKP4Q99569 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PKP4Q99569 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.02■□□□□ 0.64
PKP4Q99569 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.02■□□□□ 0.64
PKP4Q99569 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PKP4Q99569 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PKP4Q99569 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.02■□□□□ 0.64
PKP4Q99569 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.02■□□□□ 0.64
PKP4Q99569 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PKP4Q99569 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PKP4Q99569 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.02■□□□□ 0.64
PKP4Q99569 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.02■□□□□ 0.64
PKP4Q99569 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
PKP4Q99569 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PKP4Q99569 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.02■□□□□ 0.64
PKP4Q99569 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PKP4Q99569 ITM2C-210ENST00000620962 501 ntBASIC19.02■□□□□ 0.64
PKP4Q99569 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PKP4Q99569 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PKP4Q99569 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PKP4Q99569 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PKP4Q99569 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PKP4Q99569 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
PKP4Q99569 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.02■□□□□ 0.63
PKP4Q99569 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.02■□□□□ 0.63
PKP4Q99569 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PKP4Q99569 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PKP4Q99569 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
PKP4Q99569 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PKP4Q99569 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PKP4Q99569 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PKP4Q99569 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PKP4Q99569 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PKP4Q99569 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.01■□□□□ 0.63
PKP4Q99569 KRASP1-201ENST00000407852 552 ntBASIC19.01■□□□□ 0.63
PKP4Q99569 AC239809.2-201ENST00000415381 517 ntBASIC19.01■□□□□ 0.63
PKP4Q99569 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PKP4Q99569 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.01■□□□□ 0.63
PKP4Q99569 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PKP4Q99569 KRT18P16-201ENST00000510337 1294 ntBASIC19.01■□□□□ 0.63
PKP4Q99569 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
PKP4Q99569 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PKP4Q99569 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PKP4Q99569 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PKP4Q99569 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PKP4Q99569 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PKP4Q99569 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19■□□□□ 0.63
PKP4Q99569 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19■□□□□ 0.63
PKP4Q99569 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PKP4Q99569 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PKP4Q99569 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PKP4Q99569 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PKP4Q99569 KRT18P29-201ENST00000397031 1267 ntBASIC19■□□□□ 0.63
PKP4Q99569 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19■□□□□ 0.63
PKP4Q99569 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19■□□□□ 0.63
PKP4Q99569 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19■□□□□ 0.63
PKP4Q99569 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19■□□□□ 0.63
PKP4Q99569 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19■□□□□ 0.63
PKP4Q99569 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19■□□□□ 0.63
PKP4Q99569 AC124016.1-201ENST00000609552 612 ntBASIC19■□□□□ 0.63
PKP4Q99569 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19■□□□□ 0.63
PKP4Q99569 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19■□□□□ 0.63
PKP4Q99569 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19■□□□□ 0.63
PKP4Q99569 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PKP4Q99569 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19■□□□□ 0.63
PKP4Q99569 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PKP4Q99569 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PKP4Q99569 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PKP4Q99569 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
PKP4Q99569 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19■□□□□ 0.63
PKP4Q99569 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PKP4Q99569 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PKP4Q99569 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PKP4Q99569 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PKP4Q99569 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.99■□□□□ 0.63
PKP4Q99569 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PKP4Q99569 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms