Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FSCN1P1-201ENST00000568912 1481 ntBASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 RNF165-205ENST00000588679 2904 ntBASIC20.3■□□□□ 0.84
CDK5RAP1Q96SZ6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 BX088651.1-201ENST00000540551 451 ntBASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDK5RAP1Q96SZ6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 UNC93B2-201ENST00000285383 730 ntBASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 AC004980.1-204ENST00000429707 299 ntBASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 AL355075.4-201ENST00000554988 638 ntBASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 REXO1L10P-201ENST00000615707 1290 ntBASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 REXO1L12P-201ENST00000622156 912 ntBASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CDK5RAP1Q96SZ6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CDK5RAP1Q96SZ6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDK5RAP1Q96SZ6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDK5RAP1Q96SZ6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 DGCR10-201ENST00000609839 495 ntBASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP1Q96SZ6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms