Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTHRC1Q96CG8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CTHRC1Q96CG8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CTHRC1Q96CG8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.14■□□□□ 0.5
CTHRC1Q96CG8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTHRC1Q96CG8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CTHRC1Q96CG8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 AL359736.2-201ENST00000621992 437 ntBASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 ZNF815P-204ENST00000434898 1737 ntBASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTHRC1Q96CG8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTHRC1Q96CG8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 AC098590.1-201ENST00000468126 897 ntBASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms