Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 AC007952.6-201ENST00000573168 2673 ntBASIC17.12■□□□□ 0.33
SPTSSAQ969W0 AC003957.1-201ENST00000625108 2673 ntBASIC17.12■□□□□ 0.33
SPTSSAQ969W0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.12■□□□□ 0.33
SPTSSAQ969W0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 AC104771.1-201ENST00000603335 964 ntBASIC17.12■□□□□ 0.33
SPTSSAQ969W0 AL121906.2-201ENST00000621597 723 ntBASIC17.12■□□□□ 0.33
SPTSSAQ969W0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
SPTSSAQ969W0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.11■□□□□ 0.33
SPTSSAQ969W0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 BCL2-203ENST00000589955 5011 ntBASIC17.1■□□□□ 0.33
SPTSSAQ969W0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 AC120498.9-201ENST00000339021 3867 ntBASIC17.1■□□□□ 0.33
SPTSSAQ969W0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 AC098934.4-201ENST00000564127 592 ntBASIC17.1■□□□□ 0.33
SPTSSAQ969W0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 AC083880.1-201ENST00000608266 535 ntBASIC17.1■□□□□ 0.33
SPTSSAQ969W0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.1■□□□□ 0.33
SPTSSAQ969W0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 AC093484.2-201ENST00000580996 2166 ntBASIC17.09■□□□□ 0.33
SPTSSAQ969W0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 AC142086.2-201ENST00000569753 217 ntBASIC17.09■□□□□ 0.33
SPTSSAQ969W0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPTSSAQ969W0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms