Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
VPS8Q8N3P4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC30.67■■■□□ 2.5
VPS8Q8N3P4 LINC01465-201ENST00000408887 1940 ntBASIC30.67■■■□□ 2.5
VPS8Q8N3P4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
VPS8Q8N3P4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
VPS8Q8N3P4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
VPS8Q8N3P4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC30.67■■■□□ 2.5
VPS8Q8N3P4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC30.67■■■□□ 2.5
VPS8Q8N3P4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC30.67■■■□□ 2.5
VPS8Q8N3P4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
VPS8Q8N3P4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
VPS8Q8N3P4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
VPS8Q8N3P4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC30.66■■■□□ 2.5
VPS8Q8N3P4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC30.66■■■□□ 2.5
VPS8Q8N3P4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC30.66■■■□□ 2.5
VPS8Q8N3P4 AP000525.1-201ENST00000608286 694 ntBASIC30.66■■■□□ 2.5
VPS8Q8N3P4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC30.66■■■□□ 2.5
VPS8Q8N3P4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC30.66■■■□□ 2.5
VPS8Q8N3P4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
VPS8Q8N3P4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
VPS8Q8N3P4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
VPS8Q8N3P4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
VPS8Q8N3P4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
VPS8Q8N3P4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC30.65■■■□□ 2.5
VPS8Q8N3P4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
VPS8Q8N3P4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC30.65■■■□□ 2.5
VPS8Q8N3P4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
VPS8Q8N3P4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
VPS8Q8N3P4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
VPS8Q8N3P4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
VPS8Q8N3P4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC30.64■■■□□ 2.5
VPS8Q8N3P4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC30.64■■■□□ 2.5
VPS8Q8N3P4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
VPS8Q8N3P4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
VPS8Q8N3P4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC30.64■■■□□ 2.5
VPS8Q8N3P4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
VPS8Q8N3P4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC30.64■■■□□ 2.5
VPS8Q8N3P4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.49
VPS8Q8N3P4 AC087499.1-201ENST00000418141 1075 ntBASIC30.64■■■□□ 2.49
VPS8Q8N3P4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
VPS8Q8N3P4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC30.64■■■□□ 2.49
VPS8Q8N3P4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
VPS8Q8N3P4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC30.63■■■□□ 2.49
VPS8Q8N3P4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
VPS8Q8N3P4 KRT8P41-201ENST00000533985 1514 ntBASIC30.63■■■□□ 2.49
VPS8Q8N3P4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
VPS8Q8N3P4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
VPS8Q8N3P4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
VPS8Q8N3P4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
VPS8Q8N3P4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
VPS8Q8N3P4 FSCN1P1-201ENST00000568912 1481 ntBASIC30.63■■■□□ 2.49
VPS8Q8N3P4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
VPS8Q8N3P4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
VPS8Q8N3P4 AC131212.4-201ENST00000623606 975 ntBASIC30.63■■■□□ 2.49
VPS8Q8N3P4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 KRT8P9-201ENST00000558927 1449 ntBASIC30.62■■■□□ 2.49
VPS8Q8N3P4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
VPS8Q8N3P4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 AL160286.2-201ENST00000567150 934 ntBASIC30.61■■■□□ 2.49
VPS8Q8N3P4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC30.61■■■□□ 2.49
VPS8Q8N3P4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
VPS8Q8N3P4 UNC93B2-201ENST00000285383 730 ntBASIC30.6■■■□□ 2.49
VPS8Q8N3P4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms