Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF111Q6ZNA4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 KRT17P1-201ENST00000399211 1546 ntBASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 MIR4758-201ENST00000577688 71 ntBASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 AC009113.1-201ENST00000570267 2443 ntBASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF111Q6ZNA4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 AL138781.1-201ENST00000566567 1274 ntBASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 AC092118.2-201ENST00000613495 667 ntBASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 LTB4R2-202ENST00000528054 3092 ntBASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF111Q6ZNA4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 KRT8P36-201ENST00000489121 1440 ntBASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 LINC01465-201ENST00000408887 1940 ntBASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms