Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC012618.2-201ENST00000428058 849 ntBASIC18.72■□□□□ 0.59
VSX2P58304 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VSX2P58304 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.72■□□□□ 0.59
VSX2P58304 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.72■□□□□ 0.59
VSX2P58304 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
VSX2P58304 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VSX2P58304 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VSX2P58304 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VSX2P58304 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VSX2P58304 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.71■□□□□ 0.59
VSX2P58304 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
VSX2P58304 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VSX2P58304 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VSX2P58304 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.71■□□□□ 0.59
VSX2P58304 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
VSX2P58304 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.71■□□□□ 0.59
VSX2P58304 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
VSX2P58304 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
VSX2P58304 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.71■□□□□ 0.59
VSX2P58304 TUBB8P6-201ENST00000436895 1288 ntBASIC18.71■□□□□ 0.59
VSX2P58304 KRT18P16-201ENST00000510337 1294 ntBASIC18.71■□□□□ 0.59
VSX2P58304 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.71■□□□□ 0.59
VSX2P58304 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.71■□□□□ 0.59
VSX2P58304 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.71■□□□□ 0.59
VSX2P58304 AC233702.5-201ENST00000584107 538 ntBASIC18.71■□□□□ 0.59
VSX2P58304 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.71■□□□□ 0.59
VSX2P58304 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.71■□□□□ 0.59
VSX2P58304 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VSX2P58304 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.71■□□□□ 0.59
VSX2P58304 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VSX2P58304 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.71■□□□□ 0.59
VSX2P58304 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VSX2P58304 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
VSX2P58304 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
VSX2P58304 TMEM179-206ENST00000616017 1645 ntBASIC18.71■□□□□ 0.58
VSX2P58304 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VSX2P58304 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.7■□□□□ 0.58
VSX2P58304 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VSX2P58304 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.7■□□□□ 0.58
VSX2P58304 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VSX2P58304 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VSX2P58304 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VSX2P58304 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VSX2P58304 AL596275.1-201ENST00000423464 877 ntBASIC18.7■□□□□ 0.58
VSX2P58304 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VSX2P58304 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.7■□□□□ 0.58
VSX2P58304 AP002982.1-201ENST00000492365 877 ntBASIC18.7■□□□□ 0.58
VSX2P58304 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VSX2P58304 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.7■□□□□ 0.58
VSX2P58304 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.7■□□□□ 0.58
VSX2P58304 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.7■□□□□ 0.58
VSX2P58304 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VSX2P58304 AL049637.2-201ENST00000641778 930 ntBASIC18.7■□□□□ 0.58
VSX2P58304 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.7■□□□□ 0.58
VSX2P58304 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.7■□□□□ 0.58
VSX2P58304 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VSX2P58304 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VSX2P58304 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
VSX2P58304 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
VSX2P58304 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
VSX2P58304 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VSX2P58304 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.69■□□□□ 0.58
VSX2P58304 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VSX2P58304 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VSX2P58304 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSX2P58304 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.69■□□□□ 0.58
VSX2P58304 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSX2P58304 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSX2P58304 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSX2P58304 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VSX2P58304 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.69■□□□□ 0.58
VSX2P58304 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
VSX2P58304 AL353807.1-201ENST00000427475 662 ntBASIC18.69■□□□□ 0.58
VSX2P58304 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.69■□□□□ 0.58
VSX2P58304 AF186192.3-201ENST00000583427 947 ntBASIC18.69■□□□□ 0.58
VSX2P58304 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.69■□□□□ 0.58
VSX2P58304 AP001412.1-201ENST00000608405 714 ntBASIC18.69■□□□□ 0.58
VSX2P58304 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSX2P58304 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.69■□□□□ 0.58
VSX2P58304 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSX2P58304 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSX2P58304 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VSX2P58304 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSX2P58304 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.68■□□□□ 0.58
VSX2P58304 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.68■□□□□ 0.58
VSX2P58304 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
VSX2P58304 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms