Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PEX3P56589 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.57■■□□□ 1.04
PEX3P56589 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.57■■□□□ 1.04
PEX3P56589 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PEX3P56589 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.57■■□□□ 1.04
PEX3P56589 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.57■■□□□ 1.04
PEX3P56589 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.57■■□□□ 1.04
PEX3P56589 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PEX3P56589 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PEX3P56589 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.57■■□□□ 1.04
PEX3P56589 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.57■■□□□ 1.04
PEX3P56589 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PEX3P56589 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.56■■□□□ 1.04
PEX3P56589 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.56■■□□□ 1.04
PEX3P56589 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PEX3P56589 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.56■■□□□ 1.04
PEX3P56589 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PEX3P56589 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PEX3P56589 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PEX3P56589 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PEX3P56589 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PEX3P56589 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PEX3P56589 RPS2P55-201ENST00000397318 883 ntBASIC21.56■■□□□ 1.04
PEX3P56589 AC107956.1-201ENST00000494359 873 ntBASIC21.56■■□□□ 1.04
PEX3P56589 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.56■■□□□ 1.04
PEX3P56589 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.56■■□□□ 1.04
PEX3P56589 C1QL1P1-201ENST00000568105 661 ntBASIC21.56■■□□□ 1.04
PEX3P56589 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PEX3P56589 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PEX3P56589 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PEX3P56589 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PEX3P56589 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.56■■□□□ 1.04
PEX3P56589 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PEX3P56589 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.55■■□□□ 1.04
PEX3P56589 KRT8P8-201ENST00000434750 1448 ntBASIC21.55■■□□□ 1.04
PEX3P56589 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PEX3P56589 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PEX3P56589 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PEX3P56589 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.55■■□□□ 1.04
PEX3P56589 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PEX3P56589 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PEX3P56589 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.55■■□□□ 1.04
PEX3P56589 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.55■■□□□ 1.04
PEX3P56589 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.55■■□□□ 1.04
PEX3P56589 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PEX3P56589 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PEX3P56589 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PEX3P56589 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PEX3P56589 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PEX3P56589 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
PEX3P56589 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.54■■□□□ 1.04
PEX3P56589 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PEX3P56589 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.54■■□□□ 1.04
PEX3P56589 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.54■■□□□ 1.04
PEX3P56589 RPS2P4-201ENST00000476944 856 ntBASIC21.54■■□□□ 1.04
PEX3P56589 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PEX3P56589 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.54■■□□□ 1.04
PEX3P56589 AF186192.3-201ENST00000583427 947 ntBASIC21.54■■□□□ 1.04
PEX3P56589 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.54■■□□□ 1.04
PEX3P56589 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PEX3P56589 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.54■■□□□ 1.04
PEX3P56589 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PEX3P56589 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PEX3P56589 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.53■■□□□ 1.04
PEX3P56589 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PEX3P56589 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.53■■□□□ 1.04
PEX3P56589 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PEX3P56589 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PEX3P56589 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PEX3P56589 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PEX3P56589 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PEX3P56589 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.53■■□□□ 1.04
PEX3P56589 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PEX3P56589 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PEX3P56589 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PEX3P56589 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PEX3P56589 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PEX3P56589 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.53■■□□□ 1.04
PEX3P56589 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.53■■□□□ 1.04
PEX3P56589 AC233702.5-201ENST00000584107 538 ntBASIC21.53■■□□□ 1.04
PEX3P56589 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.53■■□□□ 1.04
PEX3P56589 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PEX3P56589 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.53■■□□□ 1.04
PEX3P56589 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.53■■□□□ 1.04
PEX3P56589 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.53■■□□□ 1.04
PEX3P56589 AL135905.2-201ENST00000584934 1404 ntBASIC21.53■■□□□ 1.04
PEX3P56589 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.53■■□□□ 1.04
PEX3P56589 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.52■■□□□ 1.04
PEX3P56589 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms