Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
SMSP52788 BX119927.1-201ENST00000636596 1552 ntBASIC18.27■□□□□ 0.52
SMSP52788 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.27■□□□□ 0.52
SMSP52788 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMSP52788 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMSP52788 ECEL1P3-201ENST00000427961 737 ntBASIC18.27■□□□□ 0.52
SMSP52788 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.27■□□□□ 0.52
SMSP52788 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.27■□□□□ 0.52
SMSP52788 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMSP52788 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
SMSP52788 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.27■□□□□ 0.52
SMSP52788 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.27■□□□□ 0.52
SMSP52788 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.27■□□□□ 0.51
SMSP52788 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMSP52788 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMSP52788 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.26■□□□□ 0.51
SMSP52788 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.26■□□□□ 0.51
SMSP52788 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.26■□□□□ 0.51
SMSP52788 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.26■□□□□ 0.51
SMSP52788 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.26■□□□□ 0.51
SMSP52788 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SMSP52788 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SMSP52788 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 LINC01023-201ENST00000606054 436 ntBASIC18.26■□□□□ 0.51
SMSP52788 AP001412.1-201ENST00000608405 714 ntBASIC18.26■□□□□ 0.51
SMSP52788 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.26■□□□□ 0.51
SMSP52788 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SMSP52788 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMSP52788 AL020996.1-203ENST00000536896 2307 ntBASIC18.26■□□□□ 0.51
SMSP52788 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SMSP52788 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SMSP52788 KRT17P2-201ENST00000300992 1314 ntBASIC18.25■□□□□ 0.51
SMSP52788 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.25■□□□□ 0.51
SMSP52788 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.25■□□□□ 0.51
SMSP52788 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
SMSP52788 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.25■□□□□ 0.51
SMSP52788 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.25■□□□□ 0.51
SMSP52788 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SMSP52788 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.25■□□□□ 0.51
SMSP52788 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.25■□□□□ 0.51
SMSP52788 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SMSP52788 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.25■□□□□ 0.51
SMSP52788 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMSP52788 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SMSP52788 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.24■□□□□ 0.51
SMSP52788 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
SMSP52788 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.24■□□□□ 0.51
SMSP52788 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 AC211429.1-201ENST00000415277 523 ntBASIC18.24■□□□□ 0.51
SMSP52788 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.24■□□□□ 0.51
SMSP52788 FAM210CP-201ENST00000445714 574 ntBASIC18.24■□□□□ 0.51
SMSP52788 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.24■□□□□ 0.51
SMSP52788 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 AC105020.6-201ENST00000621523 1217 ntBASIC18.24■□□□□ 0.51
SMSP52788 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
SMSP52788 CYP21A1P-202ENST00000354927 1481 ntBASIC18.24■□□□□ 0.51
SMSP52788 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMSP52788 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms