Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HTR1EP28566 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HTR1EP28566 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HTR1EP28566 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HTR1EP28566 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HTR1EP28566 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR1EP28566 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR1EP28566 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR1EP28566 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HTR1EP28566 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.69■□□□□ 0.58
HTR1EP28566 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR1EP28566 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR1EP28566 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.69■□□□□ 0.58
HTR1EP28566 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HTR1EP28566 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.69■□□□□ 0.58
HTR1EP28566 AC128676.1-201ENST00000454392 318 ntBASIC18.69■□□□□ 0.58
HTR1EP28566 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.69■□□□□ 0.58
HTR1EP28566 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.69■□□□□ 0.58
HTR1EP28566 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.69■□□□□ 0.58
HTR1EP28566 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.69■□□□□ 0.58
HTR1EP28566 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.69■□□□□ 0.58
HTR1EP28566 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HTR1EP28566 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR1EP28566 AL138781.2-201ENST00000617896 1843 ntBASIC18.69■□□□□ 0.58
HTR1EP28566 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR1EP28566 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR1EP28566 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR1EP28566 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR1EP28566 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HTR1EP28566 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
HTR1EP28566 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 AP001271.2-201ENST00000624018 1556 ntBASIC18.68■□□□□ 0.58
HTR1EP28566 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.68■□□□□ 0.58
HTR1EP28566 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 KRT8P17-201ENST00000453110 1448 ntBASIC18.68■□□□□ 0.58
HTR1EP28566 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.68■□□□□ 0.58
HTR1EP28566 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
HTR1EP28566 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.68■□□□□ 0.58
HTR1EP28566 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.68■□□□□ 0.58
HTR1EP28566 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.68■□□□□ 0.58
HTR1EP28566 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.68■□□□□ 0.58
HTR1EP28566 MYC-209ENST00000641252 345 ntBASIC18.68■□□□□ 0.58
HTR1EP28566 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
HTR1EP28566 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.68■□□□□ 0.58
HTR1EP28566 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.68■□□□□ 0.58
HTR1EP28566 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
HTR1EP28566 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR1EP28566 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HTR1EP28566 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.67■□□□□ 0.58
HTR1EP28566 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HTR1EP28566 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.67■□□□□ 0.58
HTR1EP28566 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.67■□□□□ 0.58
HTR1EP28566 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.67■□□□□ 0.58
HTR1EP28566 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.67■□□□□ 0.58
HTR1EP28566 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.67■□□□□ 0.58
HTR1EP28566 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HTR1EP28566 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.67■□□□□ 0.58
HTR1EP28566 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1EP28566 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1EP28566 KRT16P6-202ENST00000425692 1426 ntBASIC18.66■□□□□ 0.58
HTR1EP28566 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HTR1EP28566 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1EP28566 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.66■□□□□ 0.58
HTR1EP28566 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1EP28566 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.66■□□□□ 0.58
HTR1EP28566 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1EP28566 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1EP28566 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HTR1EP28566 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1EP28566 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HTR1EP28566 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HTR1EP28566 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms