Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDH3P22223 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH3P22223 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH3P22223 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH3P22223 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.11■□□□□ 0.65
CDH3P22223 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH3P22223 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH3P22223 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH3P22223 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH3P22223 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH3P22223 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH3P22223 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH3P22223 FEM1AP1-201ENST00000431297 1995 ntBASIC19.11■□□□□ 0.65
CDH3P22223 AC020907.5-201ENST00000624372 1936 ntBASIC19.11■□□□□ 0.65
CDH3P22223 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH3P22223 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDH3P22223 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CDH3P22223 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH3P22223 AFG3L1P-217ENST00000557444 2447 ntBASIC19.1■□□□□ 0.65
CDH3P22223 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CDH3P22223 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH3P22223 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.1■□□□□ 0.65
CDH3P22223 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.1■□□□□ 0.65
CDH3P22223 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH3P22223 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH3P22223 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.1■□□□□ 0.65
CDH3P22223 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH3P22223 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH3P22223 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH3P22223 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH3P22223 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH3P22223 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH3P22223 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH3P22223 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH3P22223 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDH3P22223 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH3P22223 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH3P22223 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH3P22223 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 NBPF21P-201ENST00000425093 1451 ntBASIC19.09■□□□□ 0.65
CDH3P22223 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CDH3P22223 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDH3P22223 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CDH3P22223 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH3P22223 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDH3P22223 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CDH3P22223 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH3P22223 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH3P22223 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH3P22223 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.09■□□□□ 0.65
CDH3P22223 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.09■□□□□ 0.65
CDH3P22223 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CDH3P22223 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH3P22223 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH3P22223 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CDH3P22223 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH3P22223 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.08■□□□□ 0.65
CDH3P22223 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CDH3P22223 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CDH3P22223 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.08■□□□□ 0.65
CDH3P22223 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH3P22223 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH3P22223 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH3P22223 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
CDH3P22223 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.08■□□□□ 0.64
CDH3P22223 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.08■□□□□ 0.64
CDH3P22223 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.08■□□□□ 0.64
CDH3P22223 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CDH3P22223 AC073314.1-201ENST00000568729 2216 ntBASIC19.08■□□□□ 0.64
CDH3P22223 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH3P22223 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CDH3P22223 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CDH3P22223 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CDH3P22223 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH3P22223 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH3P22223 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH3P22223 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms