Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MIR3180-3-201ENST00000584616 94 ntBASIC24.07■■□□□ 1.44
KCNA3P22001 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC24.07■■□□□ 1.44
KCNA3P22001 AC092329.2-201ENST00000598402 547 ntBASIC24.07■■□□□ 1.44
KCNA3P22001 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC24.07■■□□□ 1.44
KCNA3P22001 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC24.07■■□□□ 1.44
KCNA3P22001 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
KCNA3P22001 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
KCNA3P22001 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
KCNA3P22001 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
KCNA3P22001 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
KCNA3P22001 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
KCNA3P22001 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
KCNA3P22001 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
KCNA3P22001 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
KCNA3P22001 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC24.06■■□□□ 1.44
KCNA3P22001 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
KCNA3P22001 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC24.06■■□□□ 1.44
KCNA3P22001 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC24.06■■□□□ 1.44
KCNA3P22001 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
KCNA3P22001 TBCB-205ENST00000585746 875 ntTSL 3 BASIC24.06■■□□□ 1.44
KCNA3P22001 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
KCNA3P22001 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
KCNA3P22001 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.06■■□□□ 1.44
KCNA3P22001 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
KCNA3P22001 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
KCNA3P22001 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.06■■□□□ 1.44
KCNA3P22001 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.06■■□□□ 1.44
KCNA3P22001 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.06■■□□□ 1.44
KCNA3P22001 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
KCNA3P22001 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
KCNA3P22001 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
KCNA3P22001 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
KCNA3P22001 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
KCNA3P22001 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
KCNA3P22001 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
KCNA3P22001 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
KCNA3P22001 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.05■■□□□ 1.44
KCNA3P22001 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
KCNA3P22001 AC004870.1-201ENST00000315132 882 ntBASIC24.05■■□□□ 1.44
KCNA3P22001 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24.05■■□□□ 1.44
KCNA3P22001 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC24.05■■□□□ 1.44
KCNA3P22001 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC24.05■■□□□ 1.44
KCNA3P22001 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
KCNA3P22001 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.05■■□□□ 1.44
KCNA3P22001 AL160286.2-201ENST00000567150 934 ntBASIC24.05■■□□□ 1.44
KCNA3P22001 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC24.05■■□□□ 1.44
KCNA3P22001 FGF14-AS2-201ENST00000606448 1074 ntBASIC24.05■■□□□ 1.44
KCNA3P22001 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
KCNA3P22001 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
KCNA3P22001 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
KCNA3P22001 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KCNA3P22001 ECEL1P1-201ENST00000373592 1742 ntBASIC24.04■■□□□ 1.44
KCNA3P22001 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.04■■□□□ 1.44
KCNA3P22001 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
KCNA3P22001 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC24.04■■□□□ 1.44
KCNA3P22001 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KCNA3P22001 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KCNA3P22001 HBZP1-201ENST00000354915 429 ntBASIC24.04■■□□□ 1.44
KCNA3P22001 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
KCNA3P22001 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC24.04■■□□□ 1.44
KCNA3P22001 AC009078.2-202ENST00000463353 338 ntBASIC24.04■■□□□ 1.44
KCNA3P22001 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC24.04■■□□□ 1.44
KCNA3P22001 AC111152.3-201ENST00000569699 673 ntBASIC24.04■■□□□ 1.44
KCNA3P22001 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC24.04■■□□□ 1.44
KCNA3P22001 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
KCNA3P22001 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.04■■□□□ 1.44
KCNA3P22001 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KCNA3P22001 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
KCNA3P22001 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KCNA3P22001 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KCNA3P22001 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.04■■□□□ 1.44
KCNA3P22001 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KCNA3P22001 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KCNA3P22001 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KCNA3P22001 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KCNA3P22001 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.03■■□□□ 1.44
KCNA3P22001 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KCNA3P22001 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
KCNA3P22001 KRT8P8-201ENST00000434750 1448 ntBASIC24.03■■□□□ 1.44
KCNA3P22001 FAAHP1-202ENST00000446499 1238 ntBASIC24.03■■□□□ 1.44
KCNA3P22001 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
KCNA3P22001 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC24.03■■□□□ 1.44
KCNA3P22001 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
KCNA3P22001 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.03■■□□□ 1.44
KCNA3P22001 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC24.03■■□□□ 1.44
KCNA3P22001 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
KCNA3P22001 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC24.03■■□□□ 1.44
KCNA3P22001 KRT8P41-201ENST00000533985 1514 ntBASIC24.03■■□□□ 1.44
KCNA3P22001 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KCNA3P22001 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KCNA3P22001 AC233723.2-201ENST00000623798 2106 ntBASIC24.02■■□□□ 1.44
KCNA3P22001 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
KCNA3P22001 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
KCNA3P22001 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.02■■□□□ 1.44
KCNA3P22001 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KCNA3P22001 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KCNA3P22001 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KCNA3P22001 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.02■■□□□ 1.44
KCNA3P22001 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KCNA3P22001 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms