Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.11■□□□□ 0.65
HOXC4P09017 AL390955.1-201ENST00000428694 934 ntBASIC19.11■□□□□ 0.65
HOXC4P09017 FAM207BP-201ENST00000447172 505 ntBASIC19.11■□□□□ 0.65
HOXC4P09017 AC091390.4-202ENST00000476426 537 ntBASIC19.11■□□□□ 0.65
HOXC4P09017 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
HOXC4P09017 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.11■□□□□ 0.65
HOXC4P09017 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.11■□□□□ 0.65
HOXC4P09017 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
HOXC4P09017 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
HOXC4P09017 AC010947.1-201ENST00000623454 693 ntBASIC19.11■□□□□ 0.65
HOXC4P09017 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC4P09017 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HOXC4P09017 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC4P09017 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.11■□□□□ 0.65
HOXC4P09017 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC4P09017 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXC4P09017 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HOXC4P09017 CYP2D8P-201ENST00000433633 1490 ntBASIC19.1■□□□□ 0.65
HOXC4P09017 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC4P09017 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC4P09017 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC4P09017 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC4P09017 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC4P09017 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC4P09017 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXC4P09017 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXC4P09017 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXC4P09017 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXC4P09017 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC4P09017 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC4P09017 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC4P09017 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC4P09017 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC4P09017 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC4P09017 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC4P09017 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC4P09017 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HOXC4P09017 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC4P09017 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC4P09017 LINC01568-207ENST00000641790 1380 ntBASIC19.09■□□□□ 0.65
HOXC4P09017 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC4P09017 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC4P09017 TSPY14P-201ENST00000303979 915 ntBASIC19.09■□□□□ 0.65
HOXC4P09017 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC4P09017 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC4P09017 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC4P09017 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC4P09017 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC4P09017 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.09■□□□□ 0.65
HOXC4P09017 C2orf69P3-201ENST00000565542 1120 ntBASIC19.09■□□□□ 0.65
HOXC4P09017 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.09■□□□□ 0.65
HOXC4P09017 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC4P09017 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.09■□□□□ 0.65
HOXC4P09017 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HOXC4P09017 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC4P09017 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC4P09017 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC4P09017 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.09■□□□□ 0.65
HOXC4P09017 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC4P09017 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC4P09017 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HOXC4P09017 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC4P09017 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HOXC4P09017 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.08■□□□□ 0.65
HOXC4P09017 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC4P09017 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC4P09017 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC4P09017 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC4P09017 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HOXC4P09017 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
HOXC4P09017 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC4P09017 KRT18P22-201ENST00000402024 1347 ntBASIC19.08■□□□□ 0.65
HOXC4P09017 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC4P09017 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.08■□□□□ 0.65
HOXC4P09017 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC4P09017 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC4P09017 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC4P09017 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC4P09017 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
HOXC4P09017 CRYGFP-201ENST00000418459 633 ntBASIC19.08■□□□□ 0.64
HOXC4P09017 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC4P09017 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC4P09017 EGLN1P1-201ENST00000531623 762 ntBASIC19.08■□□□□ 0.64
HOXC4P09017 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC4P09017 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC4P09017 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC4P09017 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC4P09017 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC4P09017 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HOXC4P09017 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC4P09017 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HOXC4P09017 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.08■□□□□ 0.64
HOXC4P09017 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC4P09017 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
HOXC4P09017 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
HOXC4P09017 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC4P09017 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC4P09017 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HOXC4P09017 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC4P09017 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms