Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHGBP05060 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CHGBP05060 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHGBP05060 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.56■■□□□ 1.36
CHGBP05060 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CHGBP05060 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHGBP05060 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.56■■□□□ 1.36
CHGBP05060 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.56■■□□□ 1.36
CHGBP05060 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.56■■□□□ 1.36
CHGBP05060 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHGBP05060 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHGBP05060 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.56■■□□□ 1.36
CHGBP05060 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHGBP05060 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.56■■□□□ 1.36
CHGBP05060 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHGBP05060 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHGBP05060 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHGBP05060 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CHGBP05060 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
CHGBP05060 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.55■■□□□ 1.36
CHGBP05060 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.55■■□□□ 1.36
CHGBP05060 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.55■■□□□ 1.36
CHGBP05060 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
CHGBP05060 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CHGBP05060 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHGBP05060 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHGBP05060 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHGBP05060 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHGBP05060 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHGBP05060 FAM197Y1-201ENST00000421178 764 ntBASIC23.54■■□□□ 1.36
CHGBP05060 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.54■■□□□ 1.36
CHGBP05060 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHGBP05060 AC004264.1-201ENST00000608354 794 ntBASIC23.54■■□□□ 1.36
CHGBP05060 AP006294.2-201ENST00000641667 209 ntBASIC23.54■■□□□ 1.36
CHGBP05060 AL049637.2-201ENST00000641778 930 ntBASIC23.54■■□□□ 1.36
CHGBP05060 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHGBP05060 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CHGBP05060 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHGBP05060 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
CHGBP05060 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHGBP05060 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CHGBP05060 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.53■■□□□ 1.36
CHGBP05060 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHGBP05060 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CHGBP05060 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
CHGBP05060 TUBB8P6-201ENST00000436895 1288 ntBASIC23.53■■□□□ 1.36
CHGBP05060 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.53■■□□□ 1.36
CHGBP05060 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.53■■□□□ 1.36
CHGBP05060 HLA-A-209ENST00000638375 975 ntBASIC23.53■■□□□ 1.36
CHGBP05060 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CHGBP05060 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.53■■□□□ 1.36
CHGBP05060 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHGBP05060 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHGBP05060 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
CHGBP05060 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHGBP05060 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.53■■□□□ 1.36
CHGBP05060 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHGBP05060 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CHGBP05060 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHGBP05060 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHGBP05060 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHGBP05060 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHGBP05060 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHGBP05060 AC012618.2-201ENST00000428058 849 ntBASIC23.52■■□□□ 1.36
CHGBP05060 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.52■■□□□ 1.36
CHGBP05060 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.52■■□□□ 1.36
CHGBP05060 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.52■■□□□ 1.36
CHGBP05060 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
CHGBP05060 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHGBP05060 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CHGBP05060 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CHGBP05060 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHGBP05060 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHGBP05060 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
CHGBP05060 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHGBP05060 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.52■■□□□ 1.36
CHGBP05060 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.52■■□□□ 1.36
CHGBP05060 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.52■■□□□ 1.36
CHGBP05060 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHGBP05060 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.52■■□□□ 1.36
CHGBP05060 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHGBP05060 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHGBP05060 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.51■■□□□ 1.35
CHGBP05060 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHGBP05060 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.51■■□□□ 1.35
CHGBP05060 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHGBP05060 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHGBP05060 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.51■■□□□ 1.35
CHGBP05060 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
CHGBP05060 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.51■■□□□ 1.35
CHGBP05060 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.51■■□□□ 1.35
CHGBP05060 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.51■■□□□ 1.35
CHGBP05060 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
CHGBP05060 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.51■■□□□ 1.35
CHGBP05060 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHGBP05060 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CHGBP05060 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHGBP05060 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHGBP05060 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHGBP05060 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms