Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.38■■□□□ 1.17
ALDH1A1P00352 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ALDH1A1P00352 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ALDH1A1P00352 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
ALDH1A1P00352 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ALDH1A1P00352 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ALDH1A1P00352 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ALDH1A1P00352 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.37■■□□□ 1.17
ALDH1A1P00352 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ALDH1A1P00352 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ALDH1A1P00352 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
ALDH1A1P00352 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
ALDH1A1P00352 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ALDH1A1P00352 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.37■■□□□ 1.17
ALDH1A1P00352 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ALDH1A1P00352 SPDYE15P-201ENST00000424157 909 ntBASIC22.37■■□□□ 1.17
ALDH1A1P00352 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
ALDH1A1P00352 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.37■■□□□ 1.17
ALDH1A1P00352 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22.37■■□□□ 1.17
ALDH1A1P00352 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ALDH1A1P00352 AC004263.2-201ENST00000617183 678 ntBASIC22.37■■□□□ 1.17
ALDH1A1P00352 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.37■■□□□ 1.17
ALDH1A1P00352 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.37■■□□□ 1.17
ALDH1A1P00352 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ALDH1A1P00352 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ALDH1A1P00352 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
ALDH1A1P00352 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ALDH1A1P00352 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ALDH1A1P00352 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ALDH1A1P00352 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
ALDH1A1P00352 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ALDH1A1P00352 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.36■■□□□ 1.17
ALDH1A1P00352 HBZP1-201ENST00000354915 429 ntBASIC22.36■■□□□ 1.17
ALDH1A1P00352 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ALDH1A1P00352 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC22.36■■□□□ 1.17
ALDH1A1P00352 SPDYE13P-201ENST00000445314 798 ntBASIC22.36■■□□□ 1.17
ALDH1A1P00352 TSSC2-201ENST00000450217 709 ntBASIC22.36■■□□□ 1.17
ALDH1A1P00352 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC22.36■■□□□ 1.17
ALDH1A1P00352 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ALDH1A1P00352 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
ALDH1A1P00352 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ALDH1A1P00352 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.36■■□□□ 1.17
ALDH1A1P00352 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ALDH1A1P00352 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC22.36■■□□□ 1.17
ALDH1A1P00352 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ALDH1A1P00352 GUSBP5-202ENST00000510805 1989 ntBASIC22.36■■□□□ 1.17
ALDH1A1P00352 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
ALDH1A1P00352 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
ALDH1A1P00352 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ALDH1A1P00352 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ALDH1A1P00352 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ALDH1A1P00352 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.35■■□□□ 1.17
ALDH1A1P00352 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ALDH1A1P00352 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ALDH1A1P00352 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC22.35■■□□□ 1.17
ALDH1A1P00352 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC22.35■■□□□ 1.17
ALDH1A1P00352 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ALDH1A1P00352 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
ALDH1A1P00352 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ALDH1A1P00352 NUS1P1-201ENST00000446295 882 ntBASIC22.35■■□□□ 1.17
ALDH1A1P00352 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.35■■□□□ 1.17
ALDH1A1P00352 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.35■■□□□ 1.17
ALDH1A1P00352 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC22.35■■□□□ 1.17
ALDH1A1P00352 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC22.35■■□□□ 1.17
ALDH1A1P00352 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.35■■□□□ 1.17
ALDH1A1P00352 AL121672.3-201ENST00000608644 468 ntBASIC22.35■■□□□ 1.17
ALDH1A1P00352 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.35■■□□□ 1.17
ALDH1A1P00352 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC22.35■■□□□ 1.17
ALDH1A1P00352 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ALDH1A1P00352 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ALDH1A1P00352 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.35■■□□□ 1.17
ALDH1A1P00352 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
ALDH1A1P00352 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
ALDH1A1P00352 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.34■■□□□ 1.17
ALDH1A1P00352 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
ALDH1A1P00352 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.34■■□□□ 1.17
ALDH1A1P00352 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.34■■□□□ 1.17
ALDH1A1P00352 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ALDH1A1P00352 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ALDH1A1P00352 AP000593.1-201ENST00000393668 712 ntBASIC22.34■■□□□ 1.17
ALDH1A1P00352 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC22.34■■□□□ 1.17
ALDH1A1P00352 BX276092.5-203ENST00000456199 560 ntBASIC22.34■■□□□ 1.17
ALDH1A1P00352 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ALDH1A1P00352 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.34■■□□□ 1.17
ALDH1A1P00352 UNC93B7-201ENST00000509439 705 ntBASIC22.34■■□□□ 1.17
ALDH1A1P00352 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.34■■□□□ 1.17
ALDH1A1P00352 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ALDH1A1P00352 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.34■■□□□ 1.17
ALDH1A1P00352 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ALDH1A1P00352 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ALDH1A1P00352 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ALDH1A1P00352 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
ALDH1A1P00352 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.34■■□□□ 1.17
ALDH1A1P00352 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ALDH1A1P00352 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ALDH1A1P00352 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
ALDH1A1P00352 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ALDH1A1P00352 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ALDH1A1P00352 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
ALDH1A1P00352 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms