Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.89■□□□□ 0.93
SOX1O00570 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOX1O00570 CHCHD2P8-201ENST00000429873 447 ntBASIC20.89■□□□□ 0.93
SOX1O00570 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.89■□□□□ 0.93
SOX1O00570 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.89■□□□□ 0.93
SOX1O00570 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SOX1O00570 TPSP2-201ENST00000561760 610 ntBASIC20.89■□□□□ 0.93
SOX1O00570 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SOX1O00570 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SOX1O00570 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.89■□□□□ 0.93
SOX1O00570 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.89■□□□□ 0.93
SOX1O00570 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOX1O00570 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SOX1O00570 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.89■□□□□ 0.93
SOX1O00570 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOX1O00570 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
SOX1O00570 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SOX1O00570 AC011484.1-201ENST00000377652 1995 ntBASIC20.88■□□□□ 0.93
SOX1O00570 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.88■□□□□ 0.93
SOX1O00570 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SOX1O00570 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SOX1O00570 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SOX1O00570 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.88■□□□□ 0.93
SOX1O00570 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.88■□□□□ 0.93
SOX1O00570 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SOX1O00570 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.88■□□□□ 0.93
SOX1O00570 LINC00265-3P-201ENST00000447588 903 ntBASIC20.88■□□□□ 0.93
SOX1O00570 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.88■□□□□ 0.93
SOX1O00570 KRT8P26-201ENST00000534154 1276 ntBASIC20.88■□□□□ 0.93
SOX1O00570 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.88■□□□□ 0.93
SOX1O00570 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SOX1O00570 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.88■□□□□ 0.93
SOX1O00570 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SOX1O00570 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
SOX1O00570 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SOX1O00570 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SOX1O00570 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SOX1O00570 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SOX1O00570 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SOX1O00570 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.87■□□□□ 0.93
SOX1O00570 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.87■□□□□ 0.93
SOX1O00570 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.87■□□□□ 0.93
SOX1O00570 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SOX1O00570 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SOX1O00570 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SOX1O00570 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SOX1O00570 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.87■□□□□ 0.93
SOX1O00570 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.87■□□□□ 0.93
SOX1O00570 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.87■□□□□ 0.93
SOX1O00570 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SOX1O00570 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.87■□□□□ 0.93
SOX1O00570 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SOX1O00570 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SOX1O00570 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SOX1O00570 AC116351.2-201ENST00000606540 1585 ntBASIC20.86■□□□□ 0.93
SOX1O00570 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SOX1O00570 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SOX1O00570 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SOX1O00570 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SOX1O00570 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SOX1O00570 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.86■□□□□ 0.93
SOX1O00570 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.86■□□□□ 0.93
SOX1O00570 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SOX1O00570 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SOX1O00570 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
SOX1O00570 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SOX1O00570 AC055717.3-201ENST00000622967 595 ntBASIC20.86■□□□□ 0.93
SOX1O00570 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SOX1O00570 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
SOX1O00570 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.86■□□□□ 0.93
SOX1O00570 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SOX1O00570 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SOX1O00570 PMS2P7-201ENST00000506558 1336 ntBASIC20.85■□□□□ 0.93
SOX1O00570 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SOX1O00570 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SOX1O00570 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SOX1O00570 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SOX1O00570 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.85■□□□□ 0.93
SOX1O00570 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SOX1O00570 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SOX1O00570 AC012615.1-201ENST00000565797 1299 ntBASIC20.85■□□□□ 0.93
SOX1O00570 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.85■□□□□ 0.93
SOX1O00570 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.85■□□□□ 0.93
SOX1O00570 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.85■□□□□ 0.93
SOX1O00570 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.85■□□□□ 0.93
SOX1O00570 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SOX1O00570 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SOX1O00570 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.85■□□□□ 0.93
SOX1O00570 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SOX1O00570 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SOX1O00570 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX1O00570 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX1O00570 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.84■□□□□ 0.93
SOX1O00570 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX1O00570 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.84■□□□□ 0.93
SOX1O00570 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX1O00570 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.84■□□□□ 0.93
SOX1O00570 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX1O00570 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.84■□□□□ 0.93
SOX1O00570 AP001005.1-201ENST00000571755 1248 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms