Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT2A6NDA9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT2A6NDA9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT2A6NDA9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT2A6NDA9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT2A6NDA9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 KRT8P8-201ENST00000434750 1448 ntBASIC18.6■□□□□ 0.57
LRIT2A6NDA9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 AC004264.1-201ENST00000608354 794 ntBASIC18.6■□□□□ 0.57
LRIT2A6NDA9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT2A6NDA9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 ABHD17AP1-201ENST00000358206 933 ntBASIC18.59■□□□□ 0.57
LRIT2A6NDA9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRIT2A6NDA9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.58■□□□□ 0.57
LRIT2A6NDA9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.58■□□□□ 0.57
LRIT2A6NDA9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.58■□□□□ 0.57
LRIT2A6NDA9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRIT2A6NDA9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRIT2A6NDA9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRIT2A6NDA9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 PRORSD1P-201ENST00000295112 541 ntBASIC18.58■□□□□ 0.56
LRIT2A6NDA9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 RPPH1-201ENST00000516869 333 ntBASIC18.58■□□□□ 0.56
LRIT2A6NDA9 C1QBPP2-201ENST00000528754 825 ntBASIC18.58■□□□□ 0.56
LRIT2A6NDA9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 AC110285.5-201ENST00000611501 352 ntBASIC18.58■□□□□ 0.56
LRIT2A6NDA9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LRIT2A6NDA9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRIT2A6NDA9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRIT2A6NDA9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms