Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC092747.4-201ENST00000620519 1861 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 U3.7-201ENST00000363668 216 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 SNORA67-201ENST00000384423 137 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 MT-RNR1-201ENST00000389680 954 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 HMGB3P7-201ENST00000400214 611 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 MTND4LP13-201ENST00000425022 298 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC093655.2-201ENST00000425735 631 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 MAPRE1P3-201ENST00000435438 796 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 CBX1P2-201ENST00000453841 458 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 RN7SL799P-201ENST00000475891 298 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 RN7SL30P-201ENST00000488416 306 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC015864.1-201ENST00000496512 544 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC027369.5-201ENST00000533838 755 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC127381.1-201ENST00000555979 939 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC008814.1-201ENST00000603797 406 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC012213.4-201ENST00000606457 354 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 SDR42E1P1-201ENST00000611327 477 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 AL606537.1-201ENST00000607258 2011 ntBASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4BQ9Y4P1 MAPK10-328ENST00000641553 4009 ntBASIC4.96□□□□□ -1.61
ATG4BQ9Y4P1 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
ATG4BQ9Y4P1 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.96□□□□□ -1.61
ATG4BQ9Y4P1 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AL607077.1-201ENST00000401718 499 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 BMS1P13-201ENST00000417301 885 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 RN7SL189P-201ENST00000468631 289 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 RPS21P4-201ENST00000487122 248 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 RPS4XP20-201ENST00000505751 772 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC008638.1-201ENST00000506035 866 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC016559.2-201ENST00000510759 359 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC098976.1-201ENST00000513014 541 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC006427.1-201ENST00000514359 712 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AL358913.1-201ENST00000554342 121 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC004825.1-201ENST00000555068 586 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC009268.1-201ENST00000561352 1203 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 RN7SL708P-201ENST00000580952 299 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC013244.1-201ENST00000604279 193 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AC016911.1-201ENST00000613297 452 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AL450345.1-202ENST00000605741 3881 ntBASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.96□□□□□ -1.62
ATG4BQ9Y4P1 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 OR9K1P-202ENST00000641111 3217 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 AC010132.2-201ENST00000295493 1043 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 U3.2-201ENST00000362981 210 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 U3.3-201ENST00000362986 216 ntBASIC4.95□□□□□ -1.62
ATG4BQ9Y4P1 RNA5SP90-201ENST00000364801 99 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms