Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 SMG7-216ENST00000638826 219 ntTSL 2 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 DDX11L16-201ENST00000507418 1306 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC119744.1-201ENST00000454746 1715 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 AC016582.1-202ENST00000636341 2982 ntBASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
VPS9D1Q9Y2B5 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 MAPK10-319ENST00000641459 2542 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-432P-201ENST00000384196 109 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-472P-201ENST00000384299 107 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 YBX1P8-201ENST00000421881 943 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AC126124.1-201ENST00000426104 185 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AL606752.1-201ENST00000435442 666 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AL022721.1-201ENST00000436521 505 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 GSTA11P-201ENST00000452866 669 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 SNORD127-201ENST00000458892 86 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 GMFBP1-201ENST00000467831 427 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-566P-201ENST00000516790 107 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 RNU6-201P-201ENST00000517100 61 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 IGHV7-40-201ENST00000520963 296 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AP003385.6-201ENST00000531603 374 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 OR4N1P-201ENST00000554847 949 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AC126323.4-201ENST00000566935 234 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AC140479.4-205ENST00000636339 820 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AL354854.1-201ENST00000455940 1363 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 AC005592.1-201ENST00000566527 1640 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS9D1Q9Y2B5 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 MAPK10-279ENST00000641157 2449 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AL022334.1-201ENST00000417397 1726 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 WDR95P-201ENST00000425638 1542 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 RN7SKP23-201ENST00000625159 4301 ntBASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
VPS9D1Q9Y2B5 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms