Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 AL359219.2-201ENST00000555184 348 ntBASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 PRPF19P1-201ENST00000584766 898 ntBASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 AC084373.1-201ENST00000603311 235 ntBASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 AC005252.1-201ENST00000604518 1063 ntBASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 AC079395.2-201ENST00000610982 737 ntBASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 AC007204.2-201ENST00000615022 616 ntBASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 AL391597.1-201ENST00000618707 694 ntBASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 MIR4302-201ENST00000638058 60 ntBASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHRNA9Q9UGM1 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CHRNA9Q9UGM1 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CHRNA9Q9UGM1 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
CHRNA9Q9UGM1 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 RN7SKP153-201ENST00000365026 316 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 RNA5SP339-201ENST00000390987 122 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 U3.25-201ENST00000391209 220 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 RPL12P9-201ENST00000412942 488 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AL133445.1-201ENST00000467051 452 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 RPL7P40-201ENST00000481703 745 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AC108693.1-201ENST00000496068 432 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 RPEP1-201ENST00000504507 658 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AC106872.4-201ENST00000510050 523 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 BX510359.5-201ENST00000515651 304 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 IGHV3-63-201ENST00000518422 341 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AC009303.3-201ENST00000591103 736 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AC023813.4-201ENST00000607580 580 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AL356274.1-201ENST00000617064 410 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 MIR6839-201ENST00000620425 113 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 AP003499.2-201ENST00000624100 483 ntBASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA9Q9UGM1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 AC011755.1-201ENST00000623763 2049 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 ADAM5-202ENST00000399789 1942 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 BTBD10P1-201ENST00000549824 1352 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 RNU4-44P-201ENST00000363050 141 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms