Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL20A1Q9P218 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL20A1Q9P218 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL20A1Q9P218 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL20A1Q9P218 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL20A1Q9P218 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 RNA5SP507-201ENST00000363603 121 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL20A1Q9P218 MIR765-201ENST00000390226 114 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 HMGB1P10-201ENST00000395823 563 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 DBIP1-201ENST00000401435 260 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 VN1R51P-201ENST00000411675 945 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 VN1R42P-201ENST00000424651 344 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 PSMD10P3-201ENST00000437000 448 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 GAPDHP25-201ENST00000447061 1001 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 IGBP1P3-201ENST00000447449 1000 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 AL157827.1-201ENST00000447622 132 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 AC104634.1-201ENST00000452720 462 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 SBDSP1-204ENST00000453858 737 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 AL389915.2-201ENST00000454576 441 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 RPL5P13-201ENST00000462840 709 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 RPS18P6-201ENST00000476880 458 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 RN7SL826P-201ENST00000479724 288 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 TRAV31-201ENST00000502780 342 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 RN7SKP34-201ENST00000516142 244 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 AC021851.1-201ENST00000608537 1082 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 AL159169.2-201ENST00000610061 1269 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 AL138960.1-201ENST00000613838 513 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 AC073342.3-201ENST00000624211 193 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 AC099654.8-201ENST00000637757 681 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 AC079776.5-201ENST00000641920 211 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL20A1Q9P218 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL20A1Q9P218 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL20A1Q9P218 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
COL20A1Q9P218 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL20A1Q9P218 SPATA2P1-201ENST00000431223 2055 ntBASIC6.13□□□□□ -1.43
COL20A1Q9P218 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL20A1Q9P218 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL20A1Q9P218 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AL645927.1-201ENST00000396783 406 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 RNA5SP487-201ENST00000410186 122 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC016769.2-201ENST00000414815 475 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 LINC02210-201ENST00000444561 288 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL20A1Q9P218 OTX2P1-201ENST00000450956 354 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC239798.3-201ENST00000454459 408 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC092754.1-201ENST00000472975 479 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 RPSAP50-201ENST00000481955 852 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC004453.1-201ENST00000487895 408 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL20A1Q9P218 RN7SKP67-201ENST00000515905 235 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC005341.1-201ENST00000571086 708 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC011503.2-201ENST00000594230 1500 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC015712.7-201ENST00000615211 635 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms