Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 MIR137-201ENST00000385223 102 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 SNORA11.3-201ENST00000408471 128 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 RHOT1P3-201ENST00000436571 331 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 AC073052.1-201ENST00000440417 714 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 NDUFA5P8-201ENST00000449019 346 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 AC002553.2-201ENST00000453217 340 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 RN7SL517P-201ENST00000462240 305 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 OR2A3P-201ENST00000493774 953 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 HIGD1AP14-201ENST00000507617 282 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 COX6B1P5-201ENST00000509843 249 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 AC026688.1-201ENST00000520639 1168 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 OR7E128P-201ENST00000532736 1024 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 NMNAT1P1-201ENST00000554095 876 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 SNORA11.6-201ENST00000619030 128 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 THAP12P4-201ENST00000528321 2266 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 ECM1P2-201ENST00000503354 1577 ntBASIC4.99□□□□□ -1.61
TREX1Q9NSU2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.99□□□□□ -1.61
TREX1Q9NSU2 TET1P1-201ENST00000426627 2301 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC027228.2-201ENST00000567141 2154 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 SNORA66-201ENST00000384792 133 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AP000534.2-201ENST00000412729 568 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 TMBIM7P-201ENST00000418074 855 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 SCAND3P1-201ENST00000439854 1060 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 PPIAP20-201ENST00000449839 135 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AL591623.2-201ENST00000449978 222 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC090114.3-201ENST00000479267 829 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC027308.1-201ENST00000517993 110 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC004825.1-201ENST00000555068 586 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC105036.1-201ENST00000566222 271 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 MIR1269B-201ENST00000580405 75 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC005377.1-201ENST00000605126 456 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 LINC01739-205ENST00000641890 573 ntBASIC4.98□□□□□ -1.61
TREX1Q9NSU2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.98□□□□□ -1.61
TREX1Q9NSU2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AC000374.1-201ENST00000434698 1745 ntBASIC4.97□□□□□ -1.61
TREX1Q9NSU2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AL136116.2-201ENST00000404020 785 ntBASIC4.97□□□□□ -1.61
TREX1Q9NSU2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 RN7SKP273-201ENST00000411392 314 ntBASIC4.97□□□□□ -1.61
TREX1Q9NSU2 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 PTP4A1P1-201ENST00000420539 515 ntBASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 GYG1P1-201ENST00000460864 698 ntBASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.97□□□□□ -1.61
TREX1Q9NSU2 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms