Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AC209154.1-201ENST00000582156 337 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 ZNF652P1-201ENST00000442420 1309 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AC073136.1-201ENST00000449426 2884 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 RNA5SP187-201ENST00000384400 119 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 SNORA66-201ENST00000384792 133 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC013442.1-201ENST00000397347 228 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 TXNP5-201ENST00000441043 315 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 OR2A3P-201ENST00000493774 953 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC093720.1-201ENST00000505681 714 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AL671862.1-201ENST00000515851 349 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC068993.1-201ENST00000546724 589 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 BNIP3P1-201ENST00000547295 580 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC010487.1-201ENST00000594408 1172 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC108359.1-201ENST00000616451 1211 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC011447.7-201ENST00000624228 1590 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 MIR141-201ENST00000384975 95 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC019050.1-201ENST00000418508 492 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 RPL12P43-201ENST00000420608 499 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC006466.1-201ENST00000438721 289 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 SNORA70.11-201ENST00000515987 138 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 SNORA70.13-201ENST00000516116 138 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 MIR4270-201ENST00000581799 70 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC022893.2-201ENST00000564832 3296 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC132825.1-201ENST00000463573 2247 ntBASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.47□□□□□ -1.69
KIAA1549Q9HCM3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.46□□□□□ -1.69
KIAA1549Q9HCM3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
KIAA1549Q9HCM3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 OR2B7P-201ENST00000429302 934 ntBASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 AC245028.2-201ENST00000458673 253 ntBASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 AL049874.2-201ENST00000492636 288 ntBASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 AC104971.1-201ENST00000495117 578 ntBASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 AC012339.2-201ENST00000523996 453 ntBASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 GSTP1P1-201ENST00000548078 319 ntBASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 AL512310.9-201ENST00000553311 948 ntBASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 MIR4433B-201ENST00000581329 102 ntBASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.46□□□□□ -1.7
KIAA1549Q9HCM3 AC005084.1-201ENST00000605160 304 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms