Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 RPL23AP93-201ENST00000440847 484 ntBASIC4.7□□□□□ -1.66
CHD8Q9HCK8 RPS17P2-201ENST00000461663 408 ntBASIC4.7□□□□□ -1.66
CHD8Q9HCK8 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 AC026427.2-201ENST00000506228 536 ntBASIC4.7□□□□□ -1.66
CHD8Q9HCK8 RNU2-30P-201ENST00000516209 141 ntBASIC4.7□□□□□ -1.66
CHD8Q9HCK8 AC137627.1-201ENST00000545761 289 ntBASIC4.7□□□□□ -1.66
CHD8Q9HCK8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 NCLP2-201ENST00000416078 1462 ntBASIC4.7□□□□□ -1.66
CHD8Q9HCK8 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CHD8Q9HCK8 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 RPS26P8-201ENST00000393490 348 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 OR10T1P-201ENST00000424327 947 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 SNORA70.24-201ENST00000517233 118 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 OR11H3P-201ENST00000554547 982 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AC020910.3-201ENST00000603701 874 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AL513477.2-201ENST00000607858 568 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AC135068.5-201ENST00000624197 983 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 MIR492-201ENST00000638676 116 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AP001002.1-201ENST00000625148 1513 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 MIR7-3-201ENST00000384898 110 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AC007562.1-201ENST00000421819 517 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 OR7E125P-201ENST00000443450 846 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AC023274.2-201ENST00000445264 521 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AC079168.1-201ENST00000458741 345 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AC004069.2-201ENST00000505438 1114 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 SCARNA20.4-201ENST00000516969 131 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 OR4A43P-201ENST00000532938 908 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AP003400.3-201ENST00000624904 346 ntBASIC4.69□□□□□ -1.66
CHD8Q9HCK8 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHD8Q9HCK8 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 MAPK10-344ENST00000641718 3746 ntBASIC4.68□□□□□ -1.66
CHD8Q9HCK8 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 SLC25A18P1-201ENST00000449385 454 ntBASIC4.68□□□□□ -1.66
CHD8Q9HCK8 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 UBE2DNL-203ENST00000474922 222 ntBASIC4.68□□□□□ -1.66
CHD8Q9HCK8 AC109464.1-201ENST00000511091 819 ntBASIC4.68□□□□□ -1.66
CHD8Q9HCK8 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 AC020978.9-201ENST00000624380 1141 ntBASIC4.68□□□□□ -1.66
CHD8Q9HCK8 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms