Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 5S_rRNA.28-201ENST00000638107 119 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AL450326.2-201ENST00000421913 1962 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 RNA5SP394-201ENST00000364216 119 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 MIR105-1-201ENST00000385222 81 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC004386.1-201ENST00000393214 761 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AL035079.1-201ENST00000405210 287 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 E2F6P2-201ENST00000420708 748 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC105399.1-202ENST00000447303 205 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 EEF1B2P3-201ENST00000447718 678 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AP006222.1-205ENST00000450734 457 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AL359839.1-201ENST00000451975 1160 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC093166.2-201ENST00000455969 1017 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC090686.1-201ENST00000481577 749 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 RN7SL612P-201ENST00000497704 295 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC006427.1-201ENST00000514359 712 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AL049872.1-201ENST00000556323 322 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AP003499.2-201ENST00000624100 483 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC073592.6-201ENST00000624271 415 ntBASIC3.8□□□□□ -1.8
AP1S3Q96PC3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
AP1S3Q96PC3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC106872.5-201ENST00000508856 1416 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 MTND4P26-201ENST00000415971 1359 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 CASC19-255ENST00000641733 1385 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 RNU1-74P-201ENST00000384108 171 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 RNU6-729P-201ENST00000384399 107 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 OR8V1P-201ENST00000395193 873 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AL356968.2-201ENST00000412769 1257 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 SRSF1P1-201ENST00000424058 520 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 NAP1L4P2-201ENST00000425958 899 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC069154.1-201ENST00000432914 542 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC118758.1-202ENST00000454719 225 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 RPL5P30-201ENST00000465511 891 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms