Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AL606537.1-201ENST00000607258 2011 ntBASIC5.32□□□□□ -1.56
RPRD1AQ96P16 RPL23AP27-201ENST00000415161 451 ntBASIC5.32□□□□□ -1.56
RPRD1AQ96P16 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 BX284632.1-201ENST00000478218 541 ntBASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AC020779.1-201ENST00000478757 796 ntBASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AC090114.3-201ENST00000479267 829 ntBASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AC109462.1-201ENST00000491087 368 ntBASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AC097173.1-201ENST00000505862 819 ntBASIC5.32□□□□□ -1.56
RPRD1AQ96P16 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AC051619.2-201ENST00000559063 397 ntBASIC5.32□□□□□ -1.56
RPRD1AQ96P16 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AC011447.4-201ENST00000587562 111 ntBASIC5.32□□□□□ -1.56
RPRD1AQ96P16 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 LINC01739-205ENST00000641890 573 ntBASIC5.32□□□□□ -1.56
RPRD1AQ96P16 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.32□□□□□ -1.56
RPRD1AQ96P16 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RPRD1AQ96P16 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.31□□□□□ -1.56
RPRD1AQ96P16 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 AL034549.2-201ENST00000618285 3373 ntBASIC5.31□□□□□ -1.56
RPRD1AQ96P16 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 AL358178.1-201ENST00000407698 397 ntBASIC5.31□□□□□ -1.56
RPRD1AQ96P16 OR13Z1P-201ENST00000416141 834 ntBASIC5.31□□□□□ -1.56
RPRD1AQ96P16 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 PTMAP6-201ENST00000439110 327 ntBASIC5.31□□□□□ -1.56
RPRD1AQ96P16 AC239798.3-201ENST00000454459 408 ntBASIC5.31□□□□□ -1.56
RPRD1AQ96P16 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 RN7SKP260-201ENST00000516907 149 ntBASIC5.31□□□□□ -1.56
RPRD1AQ96P16 RNA5SP230-201ENST00000517039 122 ntBASIC5.31□□□□□ -1.56
RPRD1AQ96P16 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 AC244517.3-201ENST00000616254 1235 ntBASIC5.31□□□□□ -1.56
RPRD1AQ96P16 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPRD1AQ96P16 AC008079.2-201ENST00000623543 20396 ntBASIC5.31□□□□□ -1.56
RPRD1AQ96P16 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 BTBD10P1-201ENST00000549824 1352 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 STX3-208ENST00000641815 3236 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 SNURFL-201ENST00000309296 343 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 RN7SKP114-201ENST00000410327 279 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC093162.1-201ENST00000419682 124 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC073850.1-201ENST00000449243 255 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AP002371.1-201ENST00000463604 433 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 AC097484.1-201ENST00000471148 389 ntBASIC5.3□□□□□ -1.56
RPRD1AQ96P16 RPL7AP6-201ENST00000477943 801 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms