Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RN7SL610P-201ENST00000463845 291 ntBASIC5.22□□□□□ -1.57
C9orf72Q96LT7 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 HMGB3P16-201ENST00000508037 287 ntBASIC5.22□□□□□ -1.57
C9orf72Q96LT7 RNU6-941P-201ENST00000516346 108 ntBASIC5.22□□□□□ -1.57
C9orf72Q96LT7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 BNIP3P1-201ENST00000547295 580 ntBASIC5.22□□□□□ -1.57
C9orf72Q96LT7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 MIR7155-201ENST00000615925 56 ntBASIC5.22□□□□□ -1.57
C9orf72Q96LT7 AP002505.2-201ENST00000623585 696 ntBASIC5.22□□□□□ -1.57
C9orf72Q96LT7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
C9orf72Q96LT7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
C9orf72Q96LT7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.21□□□□□ -1.57
C9orf72Q96LT7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
C9orf72Q96LT7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.21□□□□□ -1.57
C9orf72Q96LT7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
C9orf72Q96LT7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
C9orf72Q96LT7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 U3.2-201ENST00000362981 210 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 RNA5SP507-201ENST00000363603 121 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 RNU1-149P-201ENST00000390870 161 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 AC093655.2-201ENST00000425735 631 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 AC005033.1-201ENST00000428904 813 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 RPS29P10-201ENST00000439197 166 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 TPT1P1-201ENST00000458495 518 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 OR8A2P-201ENST00000528631 952 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 AGGF1P9-201ENST00000561884 913 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 MIR3936-201ENST00000584304 110 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 AL139407.1-201ENST00000613826 1175 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 RPSAP73-201ENST00000614820 330 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 AC011493.1-201ENST00000596753 1632 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf72Q96LT7 ZNF733P-202ENST00000444809 1573 ntBASIC5.21□□□□□ -1.58
C9orf72Q96LT7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 U3.3-201ENST00000362986 216 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 RPL23AP27-201ENST00000415161 451 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 COX6CP13-201ENST00000428703 226 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 AC093166.2-201ENST00000455969 1017 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 RNA5SP303-201ENST00000516192 130 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 AC012400.1-201ENST00000518452 381 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 HNRNPRP2-201ENST00000528421 743 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 AC022832.1-201ENST00000530718 645 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 HMGN2P6-201ENST00000551091 273 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 AC069307.1-201ENST00000602820 447 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 AP005131.7-201ENST00000610087 611 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 CDC27P2-201ENST00000425026 1922 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 OR55B1P-203ENST00000641518 2602 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf72Q96LT7 AC008079.2-201ENST00000623543 20396 ntBASIC5.2□□□□□ -1.58
C9orf72Q96LT7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms