Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PCNPP4-201ENST00000414817 517 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AC009302.1-201ENST00000417147 390 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 CLUHP1-201ENST00000435012 1190 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 CYCSP12-201ENST00000437729 300 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 GAPDHP58-201ENST00000438477 1006 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 MTCYBP12-201ENST00000440559 1134 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AC099063.2-201ENST00000446360 662 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AP002345.1-201ENST00000456493 928 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 ENPP7P11-201ENST00000505915 627 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 SNORA48.9-201ENST00000516419 162 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AC126177.5-201ENST00000549599 178 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 RBM22P1-201ENST00000578589 1214 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 MIMT1-201ENST00000597105 1050 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AC008814.1-201ENST00000603797 406 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AC100814.1-201ENST00000606963 623 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AL118556.2-201ENST00000614375 824 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 RPL23AP61-201ENST00000623642 466 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 SNORA17.5-201ENST00000630429 132 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 ADAM5-202ENST00000399789 1942 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 AL121839.2-201ENST00000565058 6943 ntBASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM5Q96HC4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 MIR421-201ENST00000365696 85 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 MIR143-201ENST00000385300 106 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 RPA2P2-201ENST00000419698 796 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC093655.2-201ENST00000425735 631 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC009238.2-201ENST00000431026 355 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 Z99127.2-201ENST00000441426 334 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AL353898.1-201ENST00000444055 238 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 NPM1P19-201ENST00000450070 712 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC023141.9-201ENST00000458734 412 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC021087.2-201ENST00000504656 1203 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 FABP5P6-201ENST00000510588 409 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC027544.3-201ENST00000535082 757 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC106730.2-201ENST00000566641 540 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC022884.2-201ENST00000578535 580 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 RN7SL708P-201ENST00000580952 299 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 PRPF19P1-201ENST00000584766 898 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 OR5AC4P-202ENST00000642086 985 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 OR55B1P-203ENST00000641518 2602 ntBASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM5Q96HC4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM5Q96HC4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms